Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:36350564..36353471-chr11:36357236..36359880,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs12416779	0.97[EUR][1000 genomes]
rs12417212	1.00[EUR][1000 genomes]
rs12418187	1.00[EUR][1000 genomes]
rs12418232	0.97[EUR][1000 genomes]
rs12418233	1.00[EUR][1000 genomes]
rs12419146	1.00[EUR][1000 genomes]
rs12419171	1.00[EUR][1000 genomes]
rs12419407	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12419869	1.00[EUR][1000 genomes]
rs12419905	1.00[EUR][1000 genomes]
rs12420532	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12420883	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12420977	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12420991	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12421046	1.00[EUR][1000 genomes]
rs12421160	1.00[EUR][1000 genomes]
rs12421193	1.00[EUR][1000 genomes]
rs12421413	1.00[EUR][1000 genomes]
rs12421441	1.00[EUR][1000 genomes]
rs12421813	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1584228	1.00[EUR][1000 genomes]
rs35564850	1.00[EUR][1000 genomes]
rs35926003	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4622234	0.85[EUR][1000 genomes]
rs57949473	1.00[EUR][1000 genomes]
rs7114134	1.00[EUR][1000 genomes]
rs7117688	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:36353400-36361000	Weak transcription	Brain Cingulate Gyrus	brain
2	chr11:36355400-36358000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr11:36356200-36361200	Weak transcription	Brain Anterior Caudate	brain
4	chr11:36356600-36361200	Weak transcription	Brain Substantia Nigra	brain

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