Variant report

Variant rs12423237
Chromosome Location chr12:31388242-31388243
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:31383000-31388400 Weak transcription A549 lung
2 chr12:31383200-31388400 Weak transcription Psoas Muscle Psoas
3 chr12:31385400-31388400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr12:31385800-31388800 Enhancers Adipose Nuclei Adipose
5 chr12:31386200-31390200 Bivalent Enhancer Fetal Muscle Trunk muscle
6 chr12:31387000-31388800 Enhancers Cortex derived primary cultured neurospheres brain
7 chr12:31387000-31389200 Enhancers Fetal Intestine Large intestine
8 chr12:31387200-31388800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
9 chr12:31387200-31388800 Enhancers Fetal Muscle Leg muscle
10 chr12:31387200-31389200 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr12:31387200-31389200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
12 chr12:31387400-31388800 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr12:31387400-31388800 Bivalent Enhancer HMEC breast
14 chr12:31387400-31389000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr12:31387600-31388400 Enhancers Rectal Mucosa Donor 29 rectum
16 chr12:31387600-31388600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr12:31387600-31388600 Enhancers iPS-15b Cell Line embryonic stem cell
18 chr12:31387600-31388800 Enhancers Brain Substantia Nigra brain
19 chr12:31387600-31388800 Enhancers Fetal Intestine Small intestine
20 chr12:31387600-31389200 Enhancers Brain Germinal Matrix brain
21 chr12:31387800-31388600 Enhancers Rectal Mucosa Donor 31 rectum
22 chr12:31387800-31388600 Flanking Active TSS HSMMtube muscle
23 chr12:31388000-31388400 Enhancers H1 Cell Line embryonic stem cell
24 chr12:31388000-31388400 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr12:31388000-31388400 Active TSS Brain Cingulate Gyrus brain
26 chr12:31388000-31388400 Active TSS Pancreatic Islets Pancreatic Islet
27 chr12:31388000-31388400 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
28 chr12:31388000-31388600 Enhancers H9 Cell Line embryonic stem cell
29 chr12:31388000-31388600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr12:31388000-31388600 Active TSS Brain Hippocampus Middle brain
31 chr12:31388000-31388600 Enhancers Esophagus oesophagus
32 chr12:31388000-31388800 Enhancers HUES48 Cell Line embryonic stem cell
33 chr12:31388000-31388800 Enhancers Gastric stomach
34 chr12:31388000-31388800 Enhancers Stomach Mucosa stomach
35 chr12:31388000-31389000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr12:31388000-31389000 Enhancers Pancreas Pancrea
37 chr12:31388000-31389000 Flanking Active TSS Hela-S3 cervix
38 chr12:31388000-31389200 Enhancers ES-I3 Cell Line embryonic stem cell
39 chr12:31388000-31389200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
40 chr12:31388200-31388400 Flanking Active TSS Brain Inferior Temporal Lobe brain
41 chr12:31388200-31388400 Flanking Active TSS Duodenum Mucosa Duodenum
42 chr12:31388200-31388400 Bivalent Enhancer Fetal Stomach stomach
43 chr12:31388200-31388400 Enhancers Right Ventricle heart
44 chr12:31388200-31388400 Bivalent/Poised TSS HepG2 liver
45 chr12:31388200-31388600 Enhancers HUES6 Cell Line embryonic stem cell
46 chr12:31388200-31388600 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
47 chr12:31388200-31388600 Enhancers Liver Liver
48 chr12:31388200-31388600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
49 chr12:31388200-31388600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
50 chr12:31388200-31388800 Enhancers Placenta Placenta

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