The 2.0 version of rSNPBase

Variant report

Variant rs12424715
Chromosome Location chr12:122897884-122897885
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:122860600-122905000 Weak transcription Brain Germinal Matrix brain
2 chr12:122863800-122905000 Weak transcription Dnd41 blood
3 chr12:122884600-122905200 Weak transcription Colonic Mucosa Colon
4 chr12:122885200-122902400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr12:122885200-122902600 Weak transcription Brain Inferior Temporal Lobe brain
6 chr12:122885200-122904600 Weak transcription Placenta Amnion Placenta Amnion
7 chr12:122885200-122905200 Weak transcription Fetal Muscle Trunk muscle
8 chr12:122885200-122905400 Weak transcription Fetal Thymus thymus
9 chr12:122885200-122905400 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr12:122885200-122906000 Weak transcription Ovary ovary
11 chr12:122885400-122898200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr12:122885400-122905000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr12:122885600-122905400 Weak transcription NH-A brain
14 chr12:122886200-122905400 Weak transcription Right Ventricle heart
15 chr12:122887200-122906200 Weak transcription Lung lung
16 chr12:122887600-122904800 Weak transcription HMEC breast
17 chr12:122888800-122905000 Weak transcription Esophagus oesophagus
18 chr12:122889000-122904600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr12:122889000-122905000 Weak transcription Fetal Muscle Leg muscle
20 chr12:122890000-122905000 Weak transcription Primary T cells from cord blood blood
21 chr12:122890600-122901200 Weak transcription Fetal Stomach stomach
22 chr12:122891000-122900000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr12:122891000-122900400 Weak transcription Placenta Placenta
24 chr12:122891000-122903000 Weak transcription Pancreas Pancrea
25 chr12:122891000-122905200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr12:122892000-122898000 Weak transcription Osteobl bone
27 chr12:122892000-122898200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr12:122892200-122898200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr12:122892200-122901000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr12:122892200-122902600 Weak transcription NHLF lung
31 chr12:122892200-122904000 Weak transcription HSMMtube muscle
32 chr12:122892200-122904800 Weak transcription Brain Angular Gyrus brain
33 chr12:122892400-122899000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr12:122892600-122905000 Weak transcription Fetal Intestine Large intestine
35 chr12:122892800-122902200 Weak transcription HepG2 liver
36 chr12:122895200-122905200 Weak transcription Fetal Heart heart
37 chr12:122895400-122899000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
38 chr12:122895600-122898600 Enhancers Small Intestine intestine
39 chr12:122895600-122899200 Enhancers Colon Smooth Muscle Colon
40 chr12:122896000-122898400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr12:122896000-122898800 Weak transcription Fetal Intestine Small intestine
42 chr12:122896000-122903000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr12:122896200-122904800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr12:122896200-122905000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr12:122896400-122898400 Enhancers Primary T helper 17 cells PMA-I stimulated --
46 chr12:122896400-122898400 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr12:122896400-122898800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr12:122896400-122905600 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr12:122896600-122899000 Enhancers Primary B cells from peripheral blood blood
50 chr12:122896600-122899000 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015