Variant report
| Variant | rs12426212 |
|---|---|
| Chromosome Location | chr12:59311227-59311228 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:59302000-59313000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr12:59303200-59313400 | Transcr. at gene 5' and 3' | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 3 | chr12:59303800-59311800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 4 | chr12:59303800-59312400 | Weak transcription | Gastric | stomach |
| 5 | chr12:59303800-59313000 | Weak transcription | Lung | lung |
| 6 | chr12:59304800-59312800 | Weak transcription | Placenta | Placenta |
| 7 | chr12:59306600-59313000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 8 | chr12:59308600-59311800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 9 | chr12:59308600-59314600 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 10 | chr12:59308800-59314600 | Active TSS | Stomach Smooth Muscle | stomach |
| 11 | chr12:59309000-59311800 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 12 | chr12:59309000-59312000 | Enhancers | Brain Substantia Nigra | brain |
| 13 | chr12:59309000-59312200 | Flanking Active TSS | Osteobl | bone |
| 14 | chr12:59309000-59314400 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 15 | chr12:59309000-59314600 | Active TSS | HMEC | breast |
| 16 | chr12:59309200-59312200 | Enhancers | Fetal Heart | heart |
| 17 | chr12:59309200-59314600 | Active TSS | Duodenum Mucosa | Duodenum |
| 18 | chr12:59309200-59314600 | Active TSS | Fetal Intestine Small | intestine |
| 19 | chr12:59309200-59314600 | Active TSS | Rectal Mucosa Donor 29 | rectum |
| 20 | chr12:59309200-59314800 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
| 21 | chr12:59309200-59314800 | Active TSS | Ovary | ovary |
| 22 | chr12:59309200-59315200 | Active TSS | Duodenum Smooth Muscle | Duodenum |
| 23 | chr12:59309400-59311800 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 24 | chr12:59309400-59315000 | Active TSS | Fetal Muscle Trunk | muscle |
| 25 | chr12:59309600-59311800 | Enhancers | A549 | lung |
| 26 | chr12:59309800-59311800 | Enhancers | Brain Cingulate Gyrus | brain |
| 27 | chr12:59309800-59312000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 28 | chr12:59309800-59312400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 29 | chr12:59309800-59313000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 30 | chr12:59309800-59313000 | Weak transcription | Esophagus | oesophagus |
| 31 | chr12:59309800-59313400 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 32 | chr12:59309800-59314600 | Active TSS | Skeletal Muscle Female | skeletal muscle |
| 33 | chr12:59310000-59313400 | Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 34 | chr12:59310000-59315000 | Active TSS | Fetal Intestine Large | intestine |
| 35 | chr12:59310000-59315200 | Active TSS | Rectal Smooth Muscle | rectum |
| 36 | chr12:59310400-59311400 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
| 37 | chr12:59310400-59311800 | Active TSS | Adipose Nuclei | Adipose |
| 38 | chr12:59310400-59311800 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 39 | chr12:59310400-59312800 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 40 | chr12:59310400-59313000 | Active TSS | Thymus | Thymus |
| 41 | chr12:59310400-59314400 | Active TSS | Sigmoid Colon | Sigmoid Colon |
| 42 | chr12:59310400-59314800 | Active TSS | Psoas Muscle | Psoas |
| 43 | chr12:59310400-59315200 | Active TSS | Stomach Mucosa | stomach |
| 44 | chr12:59310600-59311400 | Flanking Active TSS | Liver | Liver |
| 45 | chr12:59310600-59311400 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
| 46 | chr12:59310600-59311600 | Flanking Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 47 | chr12:59310600-59312000 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 48 | chr12:59310600-59313600 | Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 49 | chr12:59310600-59314600 | Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 50 | chr12:59310600-59314600 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
