Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11157207	1.00[CEU][hapmap]
rs11157208	1.00[CEU][hapmap]
rs11157210	1.00[CEU][hapmap]
rs11157211	1.00[CEU][hapmap]
rs12432330	1.00[CEU][hapmap]
rs12434017	1.00[CEU][hapmap]
rs12434054	0.84[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12435882	1.00[CEU][hapmap]
rs12436913	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12586374	1.00[JPT][hapmap]
rs12586435	1.00[CEU][hapmap]
rs12587357	1.00[CEU][hapmap]
rs12587521	1.00[CEU][hapmap]
rs12588259	1.00[CEU][hapmap]
rs12588276	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs12589289	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17182782	1.00[CEU][hapmap]
rs2075486	1.00[CEU][hapmap]
rs2097261	0.88[ASN][1000 genomes]
rs35240311	0.88[ASN][1000 genomes]
rs4982501	1.00[CEU][hapmap]
rs4982503	1.00[CEU][hapmap]
rs72689709	0.98[ASN][1000 genomes]
rs766738	1.00[CEU][hapmap]
rs8006784	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042309	chr14:22042511-22866936	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
2	nsv456147	chr14:22073473-22305071	Enhancers Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
3	nsv563851	chr14:22073473-22305071	Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
4	nsv563852	chr14:22205447-22344160	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
5	nsv528996	chr14:22220569-22242293	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:22219000-22228600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

Quick Search: