Variant report

Variant	rs12434785
Chromosome Location	chr14:73023875-73023876
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:73023153..73024787-chr14:73028101..73030351,2	K562	blood:
2	chr14:73023174..73024081-chr14:73371048..73371770,2	MCF-7	breast:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs2238169	0.85[CHB][hapmap]
rs2239228	0.81[CEU][hapmap]
rs7141877	0.84[CHB][hapmap];0.84[JPT][hapmap]
rs7146783	0.85[CHB][hapmap];0.88[JPT][hapmap];0.85[ASN][1000 genomes]
rs8020134	0.86[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases
3	nsv977623	chr14:73020406-73026359	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv518320	chr14:73023436-73032103	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:73012000-73025200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr14:73012200-73025600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr14:73012400-73032000	Weak transcription	Brain Germinal Matrix	brain
4	chr14:73013800-73025000	Weak transcription	Fetal Brain Female	brain
5	chr14:73014800-73026200	Weak transcription	Right Ventricle	heart
6	chr14:73017200-73025000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr14:73020000-73025200	Weak transcription	Brain Anterior Caudate	brain
8	chr14:73020000-73025200	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr14:73020200-73024400	Weak transcription	NH-A	brain
10	chr14:73020200-73025200	Weak transcription	Brain Cingulate Gyrus	brain
11	chr14:73020200-73025600	Weak transcription	Brain Angular Gyrus	brain
12	chr14:73020400-73024000	Weak transcription	HSMM	muscle
13	chr14:73020400-73025200	Weak transcription	Brain Substantia Nigra	brain
14	chr14:73020600-73025000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr14:73020800-73024800	Weak transcription	Osteobl	bone
16	chr14:73020800-73025000	Weak transcription	Ovary	ovary
17	chr14:73020800-73025200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr14:73021000-73024000	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr14:73021200-73025000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr14:73021200-73025200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr14:73021200-73025400	Weak transcription	HUES48 Cell Line	embryonic stem cell
22	chr14:73021200-73025600	Weak transcription	HUES64 Cell Line	embryonic stem cell
23	chr14:73021200-73025800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr14:73021200-73026000	Weak transcription	Fetal Heart	heart
25	chr14:73021400-73024000	Weak transcription	HSMMtube	muscle
26	chr14:73021400-73025200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
27	chr14:73021400-73025600	Weak transcription	H1 Cell Line	embryonic stem cell
28	chr14:73021400-73025600	Weak transcription	HUES6 Cell Line	embryonic stem cell
29	chr14:73021600-73025000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
30	chr14:73021600-73025000	Weak transcription	Psoas Muscle	Psoas
31	chr14:73021600-73025000	Weak transcription	Skeletal Muscle Female	skeletal muscle
32	chr14:73021800-73024200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
33	chr14:73021800-73024200	Weak transcription	Fetal Brain Male	brain
34	chr14:73021800-73025000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr14:73021800-73025000	Weak transcription	Fetal Muscle Trunk	muscle
36	chr14:73021800-73025800	Weak transcription	Aorta	Aorta
37	chr14:73022400-73024400	Weak transcription	Skeletal Muscle Male	skeletal muscle
38	chr14:73023200-73025000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr14:73023800-73024400	Weak transcription	NHLF	lung

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