Variant report

Variant	rs1243619
Chromosome Location	chr14:21047766-21047767
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:21046680..21048657-chr14:21053189..21055861,2	K562	blood:

Variant related genes	Relation type
ENSG00000258573	Chromatin interaction

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17113273	1.00[CEU][hapmap]
rs4982051	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043923	chr14:20338742-21336425	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	203 gene(s)	inside rSNPs	diseases
2	nsv541970	chr14:20338742-21336425	Strong transcription Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	203 gene(s)	inside rSNPs	diseases
3	esv21015	chr14:20800765-21257878	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	173 gene(s)	inside rSNPs	diseases
4	nsv901468	chr14:20997221-21149785	Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
5	nsv1051489	chr14:21026592-21214763	Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
6	nsv901469	chr14:21043283-21070264	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:21045800-21047800	Enhancers	H9 Cell Line	embryonic stem cell
2	chr14:21045800-21049000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr14:21045800-21049200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr14:21045800-21049600	Enhancers	K562	blood
5	chr14:21046000-21048400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
6	chr14:21046200-21049600	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr14:21046400-21048000	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr14:21046600-21047800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr14:21046600-21048600	Enhancers	H1 Cell Line	embryonic stem cell
10	chr14:21046600-21049200	Enhancers	Primary hematopoietic stem cells	blood
11	chr14:21046600-21049400	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr14:21046600-21049600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr14:21046800-21047800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr14:21047000-21047800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr14:21047000-21047800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr14:21047000-21048800	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr14:21047000-21048800	Enhancers	iPS-15b Cell Line	embryonic stem cell
18	chr14:21047000-21048800	Enhancers	iPS-18 Cell Line	embryonic stem cell
19	chr14:21047000-21048800	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr14:21047000-21049000	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr14:21047000-21049000	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr14:21047000-21049400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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