The 2.0 version of rSNPBase

Variant report

Variant rs12443194
Chromosome Location chr15:76695628-76695629
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:76639800-76727400 Weak transcription Right Ventricle heart
2 chr15:76661000-76708600 Weak transcription Brain Anterior Caudate brain
3 chr15:76661200-76698000 Weak transcription Rectal Smooth Muscle rectum
4 chr15:76661200-76710800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr15:76661600-76698000 Weak transcription Dnd41 blood
6 chr15:76664800-76698000 Weak transcription Brain Hippocampus Middle brain
7 chr15:76666200-76696200 Weak transcription Brain Angular Gyrus brain
8 chr15:76666200-76706800 Weak transcription Primary B cells from peripheral blood blood
9 chr15:76666400-76698200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr15:76673200-76727400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr15:76674600-76718400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr15:76675800-76696200 Weak transcription Fetal Brain Male brain
13 chr15:76682600-76713800 Weak transcription Fetal Intestine Small intestine
14 chr15:76683200-76699000 Weak transcription Gastric stomach
15 chr15:76684800-76718200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr15:76686800-76697600 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr15:76686800-76699800 Weak transcription Fetal Stomach stomach
18 chr15:76689000-76698600 Weak transcription Thymus Thymus
19 chr15:76691000-76698000 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr15:76691000-76703600 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr15:76691200-76698400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr15:76691200-76698400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr15:76691200-76698400 Weak transcription Fetal Kidney kidney
24 chr15:76693600-76695800 Strong transcription Duodenum Smooth Muscle Duodenum
25 chr15:76693600-76695800 Strong transcription Fetal Intestine Large intestine
26 chr15:76693600-76696200 Weak transcription Brain Substantia Nigra brain
27 chr15:76693600-76720400 Weak transcription Colon Smooth Muscle Colon
28 chr15:76693800-76696200 Weak transcription Esophagus oesophagus
29 chr15:76693800-76697200 Strong transcription Liver Liver
30 chr15:76694000-76697400 Weak transcription Brain Cingulate Gyrus brain
31 chr15:76694400-76695800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr15:76694400-76696800 Weak transcription Aorta Aorta
33 chr15:76694400-76697000 Strong transcription Rectal Mucosa Donor 29 rectum
34 chr15:76694400-76698000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr15:76694600-76697000 Strong transcription Primary T cells from cord blood blood
36 chr15:76694600-76697000 Strong transcription Primary T helper naive cells fromperipheralblood blood
37 chr15:76694600-76697000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr15:76694600-76697000 Strong transcription Adipose Nuclei Adipose
39 chr15:76694600-76697000 Strong transcription Fetal Thymus thymus
40 chr15:76694600-76697200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr15:76694600-76697400 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr15:76694800-76695800 Strong transcription Primary B cells from cord blood blood
43 chr15:76694800-76697000 Strong transcription Primary T cells fromperipheralblood blood
44 chr15:76695000-76695800 Strong transcription Primary hematopoietic stem cells blood
45 chr15:76695000-76695800 Strong transcription Primary T helper cells PMA-I stimulated --
46 chr15:76695000-76697000 Strong transcription Fetal Brain Female brain
47 chr15:76695200-76696600 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr15:76695200-76697000 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr15:76695200-76697000 Strong transcription Fetal Muscle Leg muscle
50 chr15:76695200-76697000 Strong transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015