| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1043096 |
chr16:12013915-12840769 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
36 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv571463 |
chr16:12367791-12783535 |
Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1051242 |
chr16:12482972-12897243 |
Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv542749 |
chr16:12482972-12897243 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1035581 |
chr16:12516946-12863700 |
ZNF genes & repeats Weak transcription Enhancers Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv1051607 |
chr16:12522130-13347676 |
Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
19 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv542750 |
chr16:12522130-13347676 |
Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
19 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
esv18351 |
chr16:12674207-12734557 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv1051014 |
chr16:12683657-12722792 |
Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv905351 |
chr16:12697211-12721188 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv960363 |
chr16:12710600-12725190 |
Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
rSNPs within LD-proxies of this variant (count:1)
