Variant report

Variant	rs12446644
Chromosome Location	chr16:48664818-48664819
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3385210	chr16:48664601-48666699	Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:48658000-48667200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr16:48658000-48670400	Weak transcription	Pancreas	Pancrea
3	chr16:48662800-48667400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr16:48663000-48666400	Weak transcription	Fetal Intestine Small	intestine
5	chr16:48664000-48674000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr16:48664200-48665000	Enhancers	Duodenum Smooth Muscle	Duodenum
7	chr16:48664200-48665000	Enhancers	Fetal Heart	heart
8	chr16:48664400-48665800	Weak transcription	Fetal Intestine Large	intestine
9	chr16:48664400-48666400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr16:48664600-48665000	Enhancers	Stomach Smooth Muscle	stomach
11	chr16:48664600-48665400	Enhancers	Colon Smooth Muscle	Colon
12	chr16:48664600-48666200	Weak transcription	A549	lung
13	chr16:48664800-48665800	Weak transcription	Liver	Liver
14	chr16:48664800-48665800	Weak transcription	Duodenum Mucosa	Duodenum
15	chr16:48664800-48665800	Weak transcription	HepG2	liver
16	chr16:48664800-48666200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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