Variant report

Variant rs12459565
Chromosome Location chr19:41427539-41427540
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41426200-41427600 Enhancers Rectal Mucosa Donor 31 rectum
2 chr19:41426200-41429800 Enhancers Stomach Mucosa stomach
3 chr19:41426400-41427600 Weak transcription Colonic Mucosa Colon
4 chr19:41426400-41427800 Enhancers HepG2 liver
5 chr19:41426400-41428000 Enhancers Hela-S3 cervix
6 chr19:41426400-41429600 Enhancers Ovary ovary
7 chr19:41426400-41430200 Enhancers Fetal Intestine Large intestine
8 chr19:41426400-41430200 Enhancers Fetal Intestine Small intestine
9 chr19:41426600-41428200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr19:41426600-41429000 Enhancers K562 blood
11 chr19:41426600-41429600 Enhancers Liver Liver
12 chr19:41426800-41427600 Enhancers Gastric stomach
13 chr19:41426800-41427600 Enhancers Pancreas Pancrea
14 chr19:41427000-41427600 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr19:41427000-41428000 Enhancers HUES6 Cell Line embryonic stem cell
16 chr19:41427000-41429200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr19:41427200-41427600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr19:41427200-41428000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
19 chr19:41427200-41428400 Enhancers Placenta Placenta
20 chr19:41427400-41427800 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
21 chr19:41427400-41428200 Flanking Active TSS A549 lung
22 chr19:41427400-41428400 Enhancers Duodenum Mucosa Duodenum

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