Variant report

Variant rs12461225
Chromosome Location chr19:23930414-23930415
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23922200-23933600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23923000-23940600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:23924200-23939600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:23924600-23933600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
5 chr19:23924600-23941000 Weak transcription Pancreas Pancrea
6 chr19:23925400-23933000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
7 chr19:23926000-23933600 ZNF genes & repeats Dnd41 blood
8 chr19:23926200-23932600 ZNF genes & repeats Primary B cells from peripheral blood blood
9 chr19:23927200-23931400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr19:23927200-23940800 Weak transcription Brain Angular Gyrus brain
11 chr19:23927600-23940800 Weak transcription Brain Anterior Caudate brain
12 chr19:23927800-23940800 Weak transcription Fetal Heart heart
13 chr19:23928200-23940400 Weak transcription Osteobl bone
14 chr19:23928600-23933600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr19:23928800-23934000 Weak transcription HSMMtube muscle
16 chr19:23929600-23930600 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
17 chr19:23929600-23940800 Weak transcription Brain Inferior Temporal Lobe brain
18 chr19:23929600-23940800 Weak transcription Stomach Smooth Muscle stomach
19 chr19:23929600-23941000 Weak transcription Colon Smooth Muscle Colon
20 chr19:23929600-23941000 Weak transcription Right Ventricle heart
21 chr19:23929800-23931800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr19:23929800-23932200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr19:23929800-23934200 Weak transcription Spleen Spleen
24 chr19:23929800-23937400 Weak transcription Fetal Brain Male brain
25 chr19:23929800-23940400 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr19:23929800-23940600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr19:23929800-23940600 Weak transcription Fetal Kidney kidney
28 chr19:23929800-23940800 Weak transcription Brain Cingulate Gyrus brain
29 chr19:23930000-23930800 Weak transcription Primary hematopoietic stem cells blood
30 chr19:23930000-23931000 Weak transcription Primary B cells from cord blood blood
31 chr19:23930000-23931000 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr19:23930000-23931000 Weak transcription Adipose Nuclei Adipose
33 chr19:23930000-23931000 Weak transcription Aorta Aorta
34 chr19:23930000-23931000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr19:23930000-23931000 Weak transcription Fetal Lung lung
36 chr19:23930000-23931000 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr19:23930000-23931400 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr19:23930000-23931400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr19:23930000-23931600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr19:23930000-23931800 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr19:23930000-23931800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr19:23930000-23932200 Weak transcription Ovary ovary
43 chr19:23930000-23932200 Weak transcription Thymus Thymus
44 chr19:23930000-23933400 Weak transcription Fetal Muscle Leg muscle
45 chr19:23930000-23935000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr19:23930000-23940600 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr19:23930000-23940600 Weak transcription Placenta Amnion Placenta Amnion
48 chr19:23930000-23940800 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr19:23930000-23941000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr19:23930000-23941000 Weak transcription Gastric stomach

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