The 2.0 version of rSNPBase

Variant report

Variant rs12467680
Chromosome Location chr2:231206803-231206804
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231192200-231211800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:231192600-231211600 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr2:231192600-231211800 Weak transcription Gastric stomach
4 chr2:231192600-231211800 Weak transcription Ovary ovary
5 chr2:231192600-231212200 Weak transcription Pancreas Pancrea
6 chr2:231192800-231208800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr2:231192800-231212200 Weak transcription HMEC breast
8 chr2:231192800-231223800 Weak transcription Stomach Smooth Muscle stomach
9 chr2:231193000-231212600 Weak transcription Hela-S3 cervix
10 chr2:231193200-231211800 Weak transcription NH-A brain
11 chr2:231193600-231224000 Weak transcription Rectal Smooth Muscle rectum
12 chr2:231194000-231222600 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr2:231195800-231211800 Weak transcription Left Ventricle heart
14 chr2:231199000-231211800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr2:231199400-231207600 Weak transcription NHDF-Ad bronchial
16 chr2:231200600-231211000 Weak transcription HepG2 liver
17 chr2:231200600-231211800 Weak transcription Thymus Thymus
18 chr2:231200600-231224000 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr2:231200800-231215600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr2:231201000-231209200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:231201200-231207800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr2:231201200-231208000 Weak transcription Primary hematopoietic stem cells blood
23 chr2:231201200-231211600 Weak transcription Aorta Aorta
24 chr2:231201200-231211800 Weak transcription Fetal Thymus thymus
25 chr2:231201400-231207800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr2:231201400-231208800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:231201400-231210800 Weak transcription Duodenum Mucosa Duodenum
28 chr2:231201400-231211800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr2:231201600-231207200 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr2:231201600-231207800 Weak transcription Primary T cells from cord blood blood
31 chr2:231201600-231208600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr2:231201600-231211800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr2:231201800-231207000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr2:231201800-231207200 Weak transcription Primary B cells from peripheral blood blood
35 chr2:231201800-231207200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr2:231201800-231207200 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr2:231201800-231207200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr2:231201800-231207200 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr2:231201800-231207200 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr2:231201800-231207600 Weak transcription Primary T cells fromperipheralblood blood
41 chr2:231201800-231207600 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr2:231201800-231207600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr2:231201800-231207600 Weak transcription GM12878-XiMat blood
44 chr2:231201800-231208000 Weak transcription Muscle Satellite Cultured Cells --
45 chr2:231201800-231208400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr2:231201800-231208400 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr2:231201800-231209600 Weak transcription Dnd41 blood
48 chr2:231201800-231210800 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr2:231201800-231211800 Weak transcription Liver Liver
50 chr2:231201800-231212000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015