Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10195330	0.80[EUR][1000 genomes]
rs10199508	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10203762	0.82[EUR][1000 genomes]
rs10928119	0.82[EUR][1000 genomes]
rs11896157	0.82[EUR][1000 genomes]
rs12373690	0.81[EUR][1000 genomes]
rs12373842	0.82[EUR][1000 genomes]
rs12613378	0.82[EUR][1000 genomes]
rs12614785	0.82[EUR][1000 genomes]
rs12622890	0.82[EUR][1000 genomes]
rs13386614	0.81[EUR][1000 genomes]
rs13390324	0.80[EUR][1000 genomes]
rs1437342	0.82[EUR][1000 genomes]
rs16846913	0.82[EUR][1000 genomes]
rs2164700	0.82[EUR][1000 genomes]
rs2196599	0.82[EUR][1000 genomes]
rs2381155	0.82[EUR][1000 genomes]
rs28681388	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs56078839	0.81[EUR][1000 genomes]
rs56261462	0.81[EUR][1000 genomes]
rs72983806	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7563507	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834394	chr2:142430225-142593264	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv433206	chr2:142469781-142486875	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:142469600-142471400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr2:142469600-142471600	Weak transcription	Adipose Nuclei	Adipose
3	chr2:142469600-142472000	Weak transcription	Liver	Liver
4	chr2:142469800-142472400	Weak transcription	Fetal Lung	lung

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