Variant report

Variant rs12472244
Chromosome Location chr2:234466843-234466844
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234402200-234472400 Weak transcription Psoas Muscle Psoas
2 chr2:234413000-234474200 Weak transcription Fetal Heart heart
3 chr2:234423200-234473400 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr2:234426200-234474000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr2:234428800-234474400 Weak transcription Brain Germinal Matrix brain
6 chr2:234430200-234473800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr2:234430800-234472800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr2:234432000-234467600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:234432200-234474800 Weak transcription Spleen Spleen
10 chr2:234432600-234474400 Weak transcription Colonic Mucosa Colon
11 chr2:234437200-234474400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:234441600-234474800 Weak transcription Gastric stomach
13 chr2:234442400-234474400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr2:234447800-234474800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr2:234451200-234474200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr2:234453200-234474400 Weak transcription Small Intestine intestine
17 chr2:234453600-234474000 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr2:234455400-234468400 Weak transcription Fetal Intestine Small intestine
19 chr2:234455400-234474400 Weak transcription Brain Cingulate Gyrus brain
20 chr2:234456600-234474000 Weak transcription Fetal Brain Male brain
21 chr2:234457400-234474000 Weak transcription Rectal Smooth Muscle rectum
22 chr2:234459200-234469800 Strong transcription Liver Liver
23 chr2:234459600-234470000 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr2:234459800-234469200 Strong transcription HepG2 liver
25 chr2:234460000-234469800 Strong transcription Adipose Nuclei Adipose
26 chr2:234460600-234474000 Weak transcription Colon Smooth Muscle Colon
27 chr2:234461400-234469600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr2:234461800-234474000 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr2:234462400-234467600 Weak transcription Fetal Kidney kidney
30 chr2:234462600-234467400 Weak transcription Primary T cells fromperipheralblood blood
31 chr2:234462800-234467200 Weak transcription Fetal Lung lung
32 chr2:234463000-234474200 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr2:234463200-234467200 Weak transcription Primary B cells from cord blood blood
34 chr2:234463200-234467200 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr2:234463200-234473400 Weak transcription Placenta Amnion Placenta Amnion
36 chr2:234464200-234467400 Strong transcription Fetal Stomach stomach
37 chr2:234464800-234468600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr2:234464800-234469600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
39 chr2:234465000-234469600 Strong transcription Stomach Smooth Muscle stomach
40 chr2:234465200-234468200 Strong transcription Rectal Mucosa Donor 31 rectum
41 chr2:234465400-234468000 Strong transcription Cortex derived primary cultured neurospheres brain
42 chr2:234465400-234468000 Strong transcription Rectal Mucosa Donor 29 rectum
43 chr2:234465600-234467000 Enhancers HSMM muscle
44 chr2:234465800-234467000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr2:234465800-234467400 Strong transcription Left Ventricle heart
46 chr2:234465800-234468000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr2:234465800-234469200 Strong transcription Sigmoid Colon Sigmoid Colon
48 chr2:234465800-234469600 Strong transcription Duodenum Mucosa Duodenum
49 chr2:234465800-234472400 Weak transcription K562 blood
50 chr2:234466000-234467200 Weak transcription Placenta Placenta

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