Variant report

Variant rs12473076
Chromosome Location chr2:187349063-187349064
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:187328000-187350400 Weak transcription Pancreas Pancrea
2 chr2:187339800-187349800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr2:187346400-187349200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr2:187346600-187350000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr2:187348000-187349400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
6 chr2:187348200-187349400 Active TSS Rectal Smooth Muscle rectum
7 chr2:187348200-187350000 Enhancers Primary T helper naive cells fromperipheralblood blood
8 chr2:187348200-187350000 Active TSS Duodenum Mucosa Duodenum
9 chr2:187348200-187352200 Active TSS Colonic Mucosa Colon
10 chr2:187348200-187353400 Active TSS Rectal Mucosa Donor 29 rectum
11 chr2:187348400-187349400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr2:187348400-187349800 Enhancers Primary T cells from cord blood blood
13 chr2:187348400-187350400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr2:187348600-187349400 Active TSS HMEC breast
15 chr2:187348600-187349800 Enhancers Primary monocytes fromperipheralblood blood
16 chr2:187348600-187350000 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr2:187348600-187350000 Enhancers Cortex derived primary cultured neurospheres brain
18 chr2:187348600-187350000 Weak transcription Ovary ovary
19 chr2:187348600-187352600 Active TSS Fetal Intestine Small intestine
20 chr2:187348600-187353000 Active TSS Fetal Intestine Large intestine
21 chr2:187348800-187349200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr2:187348800-187349600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr2:187348800-187349600 Weak transcription Brain Cingulate Gyrus brain
24 chr2:187348800-187349800 Enhancers Primary B cells from cord blood blood
25 chr2:187348800-187349800 Flanking Active TSS NHEK skin
26 chr2:187348800-187350000 Enhancers Primary B cells from peripheral blood blood
27 chr2:187348800-187350000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr2:187348800-187350000 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr2:187348800-187350000 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr2:187348800-187350200 Enhancers Stomach Mucosa stomach
31 chr2:187348800-187350400 Flanking Active TSS Primary hematopoietic stem cells blood
32 chr2:187348800-187350400 Flanking Active TSS Dnd41 blood
33 chr2:187348800-187350600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr2:187348800-187352200 Active TSS Duodenum Smooth Muscle Duodenum
35 chr2:187348800-187353200 Active TSS K562 blood
36 chr2:187349000-187349200 Enhancers Skeletal Muscle Female skeletal muscle
37 chr2:187349000-187349400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr2:187349000-187349400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
39 chr2:187349000-187349400 Flanking Active TSS Fetal Kidney kidney
40 chr2:187349000-187349400 Enhancers A549 lung
41 chr2:187349000-187349400 Active TSS Monocytes-CD14+_RO01746 blood
42 chr2:187349000-187349600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr2:187349000-187349600 Active TSS Primary hematopoietic stem cells short term culture blood
44 chr2:187349000-187349600 Enhancers Pancreatic Islets Pancreatic Islet
45 chr2:187349000-187349600 Active TSS HepG2 liver
46 chr2:187349000-187349600 Enhancers NHDF-Ad bronchial
47 chr2:187349000-187350000 Enhancers Primary neutrophils fromperipheralblood blood
48 chr2:187349000-187350000 Enhancers Liver Liver
49 chr2:187349000-187350000 Enhancers Brain Angular Gyrus brain
50 chr2:187349000-187350000 Enhancers Brain Substantia Nigra brain

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