Variant report

Variant rs12473092
Chromosome Location chr2:39204040-39204041
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39188000-39212400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:39188000-39212600 Weak transcription Gastric stomach
3 chr2:39188000-39213000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:39188000-39222400 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr2:39188200-39205000 Weak transcription Fetal Brain Male brain
6 chr2:39188200-39210800 Weak transcription HMEC breast
7 chr2:39188200-39211800 Weak transcription Fetal Lung lung
8 chr2:39188400-39212000 Weak transcription Fetal Muscle Leg muscle
9 chr2:39188400-39212400 Weak transcription Fetal Brain Female brain
10 chr2:39189200-39212000 Weak transcription Fetal Muscle Trunk muscle
11 chr2:39192000-39207400 Weak transcription Fetal Intestine Small intestine
12 chr2:39194000-39213000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr2:39194400-39218600 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr2:39194600-39212000 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr2:39194600-39212800 Weak transcription Spleen Spleen
16 chr2:39195200-39210400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr2:39195400-39212600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr2:39196600-39212600 Weak transcription Aorta Aorta
19 chr2:39197000-39225800 Weak transcription Placenta Amnion Placenta Amnion
20 chr2:39197200-39211000 Weak transcription Stomach Smooth Muscle stomach
21 chr2:39197400-39210800 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr2:39198600-39212600 Weak transcription HSMMtube muscle
23 chr2:39198800-39212000 Weak transcription Fetal Stomach stomach
24 chr2:39199200-39211000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr2:39199600-39220000 Weak transcription Brain Germinal Matrix brain
26 chr2:39200000-39212000 Weak transcription Primary T cells from cord blood blood
27 chr2:39200000-39212200 Weak transcription Pancreas Pancrea
28 chr2:39200200-39212000 Weak transcription Right Ventricle heart
29 chr2:39200600-39210800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr2:39200800-39227800 Weak transcription Fetal Heart heart
31 chr2:39201200-39208000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr2:39201200-39210600 Weak transcription HSMM muscle
33 chr2:39201400-39205600 Weak transcription Fetal Thymus thymus
34 chr2:39201600-39211800 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr2:39201600-39212800 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr2:39201800-39212800 Weak transcription Brain Angular Gyrus brain
37 chr2:39201800-39218600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr2:39202000-39205400 Weak transcription Brain Anterior Caudate brain
39 chr2:39202000-39205400 Weak transcription Brain Inferior Temporal Lobe brain
40 chr2:39202000-39205600 Weak transcription HepG2 liver
41 chr2:39202000-39205800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr2:39202000-39210400 Weak transcription Adipose Nuclei Adipose
43 chr2:39202000-39211400 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr2:39202000-39212600 Weak transcription Ovary ovary
45 chr2:39202000-39218800 Weak transcription Brain Substantia Nigra brain
46 chr2:39202000-39221800 Weak transcription Rectal Smooth Muscle rectum
47 chr2:39202200-39206800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr2:39202200-39210400 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr2:39202200-39210800 Weak transcription Brain Hippocampus Middle brain
50 chr2:39202200-39212600 Weak transcription Colon Smooth Muscle Colon

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