The 2.0 version of rSNPBase

Variant report

Variant rs12479922
Chromosome Location chr20:16269043-16269044
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16242400-16275000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr20:16247600-16290800 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr20:16248600-16291400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr20:16248800-16272600 Weak transcription Primary T cells from cord blood blood
5 chr20:16249000-16272800 Weak transcription Right Ventricle heart
6 chr20:16249200-16277400 Weak transcription Brain Substantia Nigra brain
7 chr20:16252000-16270800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr20:16252000-16289400 Weak transcription Rectal Smooth Muscle rectum
9 chr20:16252400-16283000 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr20:16253000-16277800 Weak transcription Brain Angular Gyrus brain
11 chr20:16254000-16278800 Weak transcription Adipose Nuclei Adipose
12 chr20:16254000-16281400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr20:16254000-16290800 Weak transcription Esophagus oesophagus
14 chr20:16254000-16298400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr20:16254200-16278600 Weak transcription Pancreas Pancrea
16 chr20:16254200-16284200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr20:16255400-16283000 Weak transcription Fetal Lung lung
18 chr20:16261400-16272800 Weak transcription Osteobl bone
19 chr20:16261600-16270800 Weak transcription HepG2 liver
20 chr20:16262600-16285400 Weak transcription Ovary ovary
21 chr20:16262600-16346200 Weak transcription Gastric stomach
22 chr20:16263600-16273200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr20:16263600-16277200 Weak transcription Stomach Smooth Muscle stomach
24 chr20:16264400-16281600 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr20:16264600-16284000 Weak transcription Aorta Aorta
26 chr20:16264800-16290800 Weak transcription Lung lung
27 chr20:16265000-16283800 Weak transcription Primary B cells from cord blood blood
28 chr20:16265000-16289000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr20:16265200-16273200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr20:16265200-16281200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr20:16265200-16282600 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr20:16265600-16270200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr20:16265600-16280600 Weak transcription Primary B cells from peripheral blood blood
34 chr20:16265600-16281400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr20:16265600-16281600 Weak transcription Duodenum Mucosa Duodenum
36 chr20:16265600-16282000 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr20:16265600-16282000 Weak transcription Fetal Intestine Small intestine
38 chr20:16265600-16282800 Weak transcription Fetal Muscle Trunk muscle
39 chr20:16265600-16284200 Weak transcription Left Ventricle heart
40 chr20:16265800-16282200 Weak transcription Psoas Muscle Psoas
41 chr20:16265800-16289200 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr20:16268000-16271000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr20:16268800-16277400 Weak transcription Fetal Muscle Leg muscle
44 chr20:16269000-16269800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015