Variant report
| Variant | rs12488582 |
|---|---|
| Chromosome Location | chr3:179600375-179600376 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:179533800-179605000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 2 | chr3:179564200-179606000 | Strong transcription | Dnd41 | blood |
| 3 | chr3:179591000-179600400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr3:179595800-179605800 | Weak transcription | Pancreas | Pancrea |
| 5 | chr3:179598200-179600600 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 6 | chr3:179598400-179600600 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 7 | chr3:179598400-179601000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 8 | chr3:179598400-179601200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 9 | chr3:179598600-179600600 | Enhancers | Brain Cingulate Gyrus | brain |
| 10 | chr3:179598600-179601200 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 11 | chr3:179598800-179600400 | Genic enhancers | Brain Hippocampus Middle | brain |
| 12 | chr3:179598800-179601000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 13 | chr3:179598800-179601000 | Enhancers | Brain Substantia Nigra | brain |
| 14 | chr3:179598800-179601200 | Enhancers | H1 Cell Line | embryonic stem cell |
| 15 | chr3:179598800-179601200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 16 | chr3:179598800-179601200 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
| 17 | chr3:179598800-179603600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 18 | chr3:179599000-179600400 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 19 | chr3:179599000-179600400 | Enhancers | Brain Angular Gyrus | brain |
| 20 | chr3:179599000-179601000 | Enhancers | Fetal Lung | lung |
| 21 | chr3:179599200-179601200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 22 | chr3:179599400-179600800 | Enhancers | Brain Anterior Caudate | brain |
| 23 | chr3:179599400-179601200 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 24 | chr3:179599600-179600400 | Enhancers | Brain Germinal Matrix | brain |
| 25 | chr3:179599600-179601000 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 26 | chr3:179599800-179600600 | Enhancers | Fetal Brain Female | brain |
| 27 | chr3:179599800-179600800 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 28 | chr3:179600200-179600800 | Enhancers | Fetal Muscle Leg | muscle |
| 29 | chr3:179600200-179601000 | Enhancers | H9 Cell Line | embryonic stem cell |
| 30 | chr3:179600200-179601000 | Flanking Active TSS | GM12878-XiMat | blood |
| 31 | chr3:179600200-179601200 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
