Variant report

Variant rs1248859
Chromosome Location chr3:85017098-85017099
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:85011600-85018400 Enhancers iPS-15b Cell Line embryonic stem cell
2 chr3:85013400-85019200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr3:85014400-85020000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
4 chr3:85016200-85017600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
5 chr3:85016200-85018000 Enhancers H1 Cell Line embryonic stem cell
6 chr3:85016400-85017600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr3:85016600-85017600 Enhancers Fetal Brain Male brain
8 chr3:85016600-85017800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr3:85016600-85018000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
10 chr3:85016600-85018200 Active TSS Psoas Muscle Psoas
11 chr3:85016800-85017200 Enhancers ES-WA7 Cell Line embryonic stem cell
12 chr3:85016800-85017200 Enhancers H9 Cell Line embryonic stem cell
13 chr3:85016800-85017200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
14 chr3:85016800-85017200 Bivalent Enhancer Adipose Nuclei Adipose
15 chr3:85016800-85017200 Flanking Active TSS Brain Cingulate Gyrus brain
16 chr3:85016800-85017200 Enhancers Fetal Muscle Leg muscle
17 chr3:85016800-85017200 Enhancers Fetal Stomach stomach
18 chr3:85016800-85017400 Active TSS Brain Angular Gyrus brain
19 chr3:85016800-85017600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
20 chr3:85016800-85017600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
21 chr3:85016800-85017600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
22 chr3:85016800-85017600 Enhancers Muscle Satellite Cultured Cells --
23 chr3:85016800-85018000 Active TSS Brain Hippocampus Middle brain
24 chr3:85016800-85018000 Active TSS Brain Substantia Nigra brain
25 chr3:85016800-85018000 Enhancers Fetal Lung lung
26 chr3:85016800-85018000 Active TSS Skeletal Muscle Female skeletal muscle
27 chr3:85016800-85018200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
28 chr3:85016800-85018400 Active TSS Brain Inferior Temporal Lobe brain
29 chr3:85016800-85018400 Active TSS Skeletal Muscle Male skeletal muscle
30 chr3:85016800-85019200 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr3:85017000-85017200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
32 chr3:85017000-85017200 Enhancers Aorta Aorta
33 chr3:85017000-85017400 Active TSS iPS-20b Cell Line embryonic stem cell
34 chr3:85017000-85017400 Active TSS Cortex derived primary cultured neurospheres brain
35 chr3:85017000-85017600 Active TSS Brain Anterior Caudate brain
36 chr3:85017000-85017600 Active TSS Brain Germinal Matrix brain
37 chr3:85017000-85017600 Active TSS Fetal Brain Female brain

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