Variant report

Variant rs12489547
Chromosome Location chr3:195682747-195682748
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195659600-195685600 Weak transcription Small Intestine intestine
2 chr3:195665200-195691800 Weak transcription HSMMtube muscle
3 chr3:195665400-195685200 Weak transcription Aorta Aorta
4 chr3:195667400-195684200 Weak transcription Spleen Spleen
5 chr3:195667400-195686200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr3:195677800-195691800 Weak transcription NHDF-Ad bronchial
7 chr3:195678000-195696200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr3:195679000-195691600 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr3:195679000-195695800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr3:195680600-195682800 Active TSS HUES48 Cell Line embryonic stem cell
11 chr3:195680600-195682800 Active TSS iPS-18 Cell Line embryonic stem cell
12 chr3:195681600-195685600 Weak transcription Gastric stomach
13 chr3:195681600-195691600 Weak transcription Primary T cells from cord blood blood
14 chr3:195681600-195696200 Weak transcription Primary B cells from cord blood blood
15 chr3:195681800-195684200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr3:195681800-195684200 Weak transcription NHEK skin
17 chr3:195681800-195685200 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr3:195681800-195685400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr3:195681800-195685400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr3:195681800-195685400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr3:195681800-195685400 Weak transcription Brain Anterior Caudate brain
22 chr3:195681800-195685400 Weak transcription Brain Substantia Nigra brain
23 chr3:195681800-195685600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr3:195681800-195685600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr3:195681800-195685600 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr3:195681800-195685600 Weak transcription Brain Cingulate Gyrus brain
27 chr3:195681800-195685600 Weak transcription Left Ventricle heart
28 chr3:195681800-195685600 Weak transcription Pancreas Pancrea
29 chr3:195681800-195685600 Weak transcription Stomach Smooth Muscle stomach
30 chr3:195681800-195685600 Weak transcription GM12878-XiMat blood
31 chr3:195681800-195685800 Weak transcription Colon Smooth Muscle Colon
32 chr3:195681800-195685800 Weak transcription NH-A brain
33 chr3:195681800-195686000 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr3:195681800-195686000 Weak transcription HSMM muscle
35 chr3:195681800-195686200 Weak transcription Thymus Thymus
36 chr3:195681800-195688200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr3:195681800-195688600 Weak transcription Muscle Satellite Cultured Cells --
38 chr3:195681800-195688800 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr3:195681800-195689400 Weak transcription A549 lung
40 chr3:195681800-195691600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr3:195681800-195691600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr3:195681800-195691600 Weak transcription Stomach Mucosa stomach
43 chr3:195681800-195695600 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr3:195681800-195696200 Weak transcription HepG2 liver
45 chr3:195681800-195696400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr3:195681800-195696400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr3:195681800-195696800 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr3:195682000-195683600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr3:195682000-195685200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr3:195682000-195685600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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