Variant report

Variant	rs1250109
Chromosome Location	chr4:1227951-1227952
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr4:1227800-1227962	SK-N-SH_RA	brain:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
2	CTCF	chr4:1227840-1227990	HA-sp	spinal cord:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
3	CTCF	chr4:1227820-1227970	RPTEC	kidney:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
4	CTCF	chr4:1227820-1227970	HPF	lung:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
5	RAD21	chr4:1226729-1228479	SK-N-SH	brain:	n/a	chr4:1227264-1227278 chr4:1227881-1227900 chr4:1228152-1228166
6	CTCF	chr4:1227820-1227970	GM12871	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
7	CTCF	chr4:1227840-1227990	GM12869	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
8	CTCF	chr4:1227820-1227970	AG04449	skin:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
9	POLR2A	chr4:1227455-1228060	HL-60	blood:	n/a	n/a
10	CTCF	chr4:1227860-1228010	SAEC	small airway:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
11	CTCF	chr4:1227840-1227990	HFF-Myc	foreskin:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
12	CTCF	chr4:1227820-1227970	AG10803	skin:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
13	CTCF	chr4:1227711-1228068	GM12878	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
14	POLR2A	chr4:1227460-1228191	HepG2	liver:	n/a	n/a
15	CTCF	chr4:1227840-1227990	AoAF	blood vessel:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
16	POLR2A	chr4:1227664-1228363	PFSK-1	brain:	n/a	n/a
17	CTCF	chr4:1227820-1227972	GM12878	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
18	CTCF	chr4:1227840-1227990	HAc	cerebellar:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
19	USF2	chr4:1227946-1228016	Hela-S3	cervix:	n/a	n/a
20	CTCF	chr4:1227834-1227973	ProgFib	skin:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
21	CTCF	chr4:1227820-1227970	HRPEpiC	eye:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
22	CTCF	chr4:1227820-1227970	GM12873	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
23	POLR2A	chr4:1227820-1228049	GM12891	blood:	n/a	n/a
24	CTCF	chr4:1227840-1227990	HMEC	breast:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
25	CTCF	chr4:1227846-1227956	K562	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
26	POLR2A	chr4:1227573-1228023	GM12878	blood:	n/a	n/a
27	CTCF	chr4:1227820-1227970	GM12870	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
28	CTCF	chr4:1227840-1227990	GM12873	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
29	CTCF	chr4:1227860-1228010	HMEC	breast:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
30	CTCF	chr4:1227840-1227990	HVMF	connective:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
31	CTCF	chr4:1227840-1227990	WERI-Rb-1	eye:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
32	MXI1	chr4:1227587-1228019	IMR90	lung:	n/a	n/a
33	CTCF	chr4:1227820-1227970	GM12867	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
34	POLR2A	chr4:1227379-1228437	SK-N-MC	brain:	n/a	n/a
35	POLR2A	chr4:1226596-1228106	PFSK-1	brain:	n/a	n/a
36	CTCF	chr4:1227855-1227973	MCF-7	breast:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
37	CTCF	chr4:1227860-1228010	WI-38	lung:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
38	CTCF	chr4:1227840-1227990	AG09309	skin:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
39	CTCF	chr4:1227795-1228021	Lung_OC	lung:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
40	POLR2A	chr4:1227449-1228044	GM12878	blood:	n/a	n/a
41	POLR2A	chr4:1227646-1228065	GM12891	blood:	n/a	n/a
42	CTCF	chr4:1227798-1227991	GM19238	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
43	CTCF	chr4:1227705-1228071	IMR90	lung:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
44	CTCF	chr4:1227842-1227981	Spleen_OC	spleen:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
45	CTCF	chr4:1227820-1227970	HMF	breast:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
46	CTCF	chr4:1227860-1228010	HVMF	connective:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
47	CTCF	chr4:1227840-1227990	NHDF-neo	bronchial:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
48	CTCF	chr4:1226616-1228183	SK-N-SH	brain:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898
49	RAD21	chr4:1227733-1227994	SK-N-SH_RA	brain:	n/a	chr4:1227881-1227900
50	CTCF	chr4:1227830-1227953	K562	blood:	n/a	chr4:1227883-1227901 chr4:1227878-1227899 chr4:1227889-1227898

No.	Distal block	Cell Line	Cell type
1	chr4:1159882..1162594-chr4:1225934..1228487,2	MCF-7	breast:
2	chr4:1205834..1208746-chr4:1226457..1228401,2	K562	blood:
3	chr4:1227874..1230921-chr4:1231910..1234082,4	MCF-7	breast:

Variant related genes	Relation type
CTBP1	TF binding region
ENSG00000273179	Chromatin interaction
ENSG00000159692	Chromatin interaction

Extended variants
information (count: 43 )
Associated
traits (count: 8 )

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1250107	0.95[CEU][hapmap];0.85[TSI][hapmap];0.84[EUR][1000 genomes]
rs1250111	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1250112	0.85[EUR][1000 genomes]
rs1250113	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1250114	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1250115	0.95[CEU][hapmap];0.83[MEX][hapmap];0.85[TSI][hapmap];0.85[EUR][1000 genomes]
rs1250116	0.95[CEU][hapmap];0.85[EUR][1000 genomes]
rs1250117	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1268975	0.95[CEU][hapmap];0.83[MEX][hapmap];0.81[TSI][hapmap];0.84[EUR][1000 genomes]
rs1680054	0.83[EUR][1000 genomes]
rs1680057	0.83[MEX][hapmap]
rs1680060	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1732110	0.85[EUR][1000 genomes]
rs2004531	0.84[EUR][1000 genomes]
rs2020137	0.84[EUR][1000 genomes]
rs2046151	0.85[EUR][1000 genomes]
rs884421	0.95[CEU][hapmap];0.83[MEX][hapmap];0.85[TSI][hapmap];0.85[EUR][1000 genomes]
rs900019	0.95[CEU][hapmap];0.83[MEX][hapmap];0.85[TSI][hapmap];0.85[EUR][1000 genomes]
rs900020	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs900021	0.93[CEU][hapmap];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv822425	chr4:540105-1413799	Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
2	nsv530490	chr4:614355-1399150	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	esv3339080	chr4:970630-1546223	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
4	nsv829835	chr4:1097586-1304239	Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
5	nsv878328	chr4:1141573-1990425	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	121 gene(s)	inside rSNPs	diseases
6	nsv878329	chr4:1147407-1254930	Genic enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
7	nsv878330	chr4:1147407-1523930	Strong transcription Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
8	nsv461151	chr4:1159680-1236840	Enhancers Flanking Bivalent TSS/Enh Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
9	nsv593277	chr4:1159680-1236840	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
10	nsv878331	chr4:1159680-1254930	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
11	nsv461152	chr4:1159680-1415698	Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
12	nsv593278	chr4:1159680-1415698	Enhancers Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
13	nsv461153	chr4:1174861-1254930	Genic enhancers Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
14	nsv593279	chr4:1174861-1254930	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
15	nsv461154	chr4:1179213-1254930	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Genic enhancers Active TSS Strong transcription Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
16	nsv593280	chr4:1179213-1254930	Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
17	nsv878332	chr4:1179213-1254930	Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
18	nsv997971	chr4:1191256-1518521	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
19	nsv878333	chr4:1193832-1254930	Enhancers Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
20	nsv461155	chr4:1203265-1352685	Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
21	nsv593281	chr4:1203265-1352685	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
22	nsv1002097	chr4:1212573-1320086	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
23	nsv536986	chr4:1212573-1320086	Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases

mRNA abundance (count:8)

SNP	Gene	Cis/trans	Tissue	Source
rs1250109	CRIPAK	cis	lymphoblastoid	seeQTL
rs1250109	CRIPAK	Cis_1M	lymphoblastoid	RTeQTL
rs1250109	CRIPAK	cis	cerebellum	SCAN
rs1250109	KIAA1530	cis	cerebellum	SCAN
rs1250109	CRIPAK	cis	parietal	SCAN
rs1250109	MFSD10	cis	parietal	SCAN
rs1250109	KIAA1530	cis	parietal	SCAN
rs1250109	MAEA	cis	Thyroid	GTEx

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:1204400-1235800	Strong transcription	HUES6 Cell Line	embryonic stem cell
2	chr4:1204600-1236200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr4:1204800-1237000	Weak transcription	Psoas Muscle	Psoas
4	chr4:1205800-1228200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr4:1208800-1228000	Strong transcription	Muscle Satellite Cultured Cells	--
6	chr4:1211400-1235400	Weak transcription	Small Intestine	intestine
7	chr4:1211600-1235400	Strong transcription	Sigmoid Colon	Sigmoid Colon
8	chr4:1212600-1237000	Strong transcription	Dnd41	blood
9	chr4:1214200-1235600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
10	chr4:1214200-1236800	Strong transcription	Primary T cells from cord blood	blood
11	chr4:1214400-1235200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
12	chr4:1214400-1235600	Strong transcription	H1 Cell Line	embryonic stem cell
13	chr4:1214400-1236400	Strong transcription	Primary neutrophils fromperipheralblood	blood
14	chr4:1214400-1238400	Strong transcription	Thymus	Thymus
15	chr4:1214600-1235800	Strong transcription	Primary T helper cells fromperipheralblood	blood
16	chr4:1214600-1236200	Strong transcription	Monocytes-CD14+_RO01746	blood
17	chr4:1215000-1235200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr4:1215000-1236000	Strong transcription	Primary monocytes fromperipheralblood	blood
19	chr4:1215400-1236000	Strong transcription	Primary B cells from peripheral blood	blood
20	chr4:1215800-1235600	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
21	chr4:1216400-1235400	Strong transcription	Primary T helper cells PMA-I stimulated	--
22	chr4:1216400-1236000	Strong transcription	Fetal Thymus	thymus
23	chr4:1216600-1236000	Strong transcription	GM12878-XiMat	blood
24	chr4:1217200-1235400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
25	chr4:1217200-1235800	Strong transcription	iPS-15b Cell Line	embryonic stem cell
26	chr4:1217600-1235200	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr4:1218200-1234600	Strong transcription	Primary T cells fromperipheralblood	blood
28	chr4:1218800-1235400	Strong transcription	H9 Cell Line	embryonic stem cell
29	chr4:1219000-1235400	Strong transcription	Gastric	stomach
30	chr4:1219000-1240200	Weak transcription	Hela-S3	cervix
31	chr4:1219800-1234800	Strong transcription	Fetal Intestine Large	intestine
32	chr4:1220600-1235400	Strong transcription	HUES64 Cell Line	embryonic stem cell
33	chr4:1221600-1229400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
34	chr4:1221600-1236400	Weak transcription	Fetal Heart	heart
35	chr4:1221600-1240200	Weak transcription	Pancreatic Islets	Pancreatic Islet
36	chr4:1221800-1228800	Weak transcription	HSMMtube	muscle
37	chr4:1221800-1236400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
38	chr4:1222000-1228600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
39	chr4:1222000-1228800	Weak transcription	HSMM	muscle
40	chr4:1222000-1240800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
41	chr4:1222200-1228800	Weak transcription	HMEC	breast
42	chr4:1222600-1236000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr4:1223000-1236600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr4:1223200-1236800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
45	chr4:1223600-1234200	Strong transcription	Osteobl	bone
46	chr4:1223600-1234800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
47	chr4:1223800-1236200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr4:1224000-1235400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
49	chr4:1224200-1229000	Genic enhancers	Placenta	Placenta
50	chr4:1224400-1228600	Weak transcription	Primary B cells from cord blood	blood

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