Variant report

Variant rs12506140
Chromosome Location chr4:56897254-56897255
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56819000-56897400 Weak transcription HSMMtube muscle
2 chr4:56835400-56904800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr4:56837200-56905000 Weak transcription Brain Substantia Nigra brain
4 chr4:56857600-56897400 Strong transcription Fetal Thymus thymus
5 chr4:56857600-56898200 Strong transcription Dnd41 blood
6 chr4:56857600-56898200 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr4:56872200-56904800 Weak transcription HepG2 liver
8 chr4:56880000-56897400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
9 chr4:56880600-56898200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr4:56883800-56897600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr4:56886400-56899600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr4:56888600-56898600 Weak transcription Gastric stomach
13 chr4:56890600-56897400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr4:56890600-56897600 Strong transcription Primary B cells from peripheral blood blood
15 chr4:56890600-56898000 Strong transcription HUES64 Cell Line embryonic stem cell
16 chr4:56891400-56899200 Weak transcription Osteobl bone
17 chr4:56891400-56904800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr4:56891600-56897400 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr4:56891600-56899800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr4:56891600-56902800 Weak transcription HSMM muscle
21 chr4:56891600-56907200 Weak transcription H1 Cell Line embryonic stem cell
22 chr4:56891800-56898800 Weak transcription Esophagus oesophagus
23 chr4:56891800-56899600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr4:56891800-56899800 Weak transcription Fetal Stomach stomach
25 chr4:56891800-56900800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr4:56891800-56903800 Weak transcription NHDF-Ad bronchial
27 chr4:56891800-56905000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr4:56891800-56907000 Weak transcription Spleen Spleen
29 chr4:56891800-56907600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr4:56892200-56897600 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr4:56892200-56899000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr4:56892200-56899200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr4:56892400-56897800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr4:56892800-56898200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr4:56893000-56898000 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr4:56893400-56898200 Weak transcription NHEK skin
37 chr4:56893600-56897600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr4:56893600-56897600 Weak transcription Fetal Brain Male brain
39 chr4:56893600-56899200 Weak transcription HUVEC blood vessel
40 chr4:56893600-56907200 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr4:56893600-56907400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr4:56893800-56898000 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr4:56893800-56905000 Weak transcription Placenta Placenta
44 chr4:56894000-56897600 Weak transcription A549 lung
45 chr4:56894000-56898600 Weak transcription Fetal Muscle Leg muscle
46 chr4:56894000-56898600 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr4:56894000-56898800 Weak transcription Right Ventricle heart
48 chr4:56894200-56899200 Weak transcription NH-A brain
49 chr4:56894200-56907000 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr4:56894400-56898200 Weak transcription Fetal Muscle Trunk muscle

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