Variant report

Variant	rs12507238
Chromosome Location	chr4:125637335-125637336
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10025996	0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12510154	1.00[EUR][1000 genomes]
rs17008498	0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs17008500	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17008503	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72931227	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72931230	0.91[AFR][1000 genomes]
rs72931232	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72931241	0.91[AFR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125634800-125639200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr4:125635000-125637600	Enhancers	Fetal Lung	lung
3	chr4:125635000-125638000	Weak transcription	Dnd41	blood
4	chr4:125635000-125639800	Weak transcription	HepG2	liver
5	chr4:125635000-125644800	Weak transcription	NHDF-Ad	bronchial
6	chr4:125635200-125638200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr4:125635200-125648000	Weak transcription	HSMM	muscle
8	chr4:125636600-125637400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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