Variant report

Variant rs12517508
Chromosome Location chr5:115423574-115423575
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115421200-115428600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:115421400-115424800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr5:115421400-115428200 Weak transcription H9 Cell Line embryonic stem cell
4 chr5:115421400-115428400 Weak transcription Lung lung
5 chr5:115421400-115428600 Weak transcription Gastric stomach
6 chr5:115421400-115428800 Weak transcription Placenta Amnion Placenta Amnion
7 chr5:115421400-115433400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr5:115421400-115444200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:115421400-115446400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr5:115421400-115446400 Weak transcription Esophagus oesophagus
11 chr5:115421600-115428200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr5:115421600-115428200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr5:115421600-115428200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr5:115421600-115428200 Weak transcription Ovary ovary
15 chr5:115421600-115428400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr5:115421600-115428600 Weak transcription Psoas Muscle Psoas
17 chr5:115421600-115436600 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr5:115421800-115423800 Weak transcription HSMM muscle
19 chr5:115421800-115424000 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr5:115421800-115424200 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr5:115421800-115424200 Weak transcription Primary B cells from cord blood blood
22 chr5:115421800-115424400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr5:115421800-115427200 Weak transcription H1 Cell Line embryonic stem cell
24 chr5:115421800-115427200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr5:115421800-115427200 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr5:115421800-115427200 Weak transcription NHLF lung
27 chr5:115421800-115427400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr5:115421800-115428200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr5:115421800-115428200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr5:115421800-115428200 Weak transcription HSMMtube muscle
31 chr5:115421800-115428600 Weak transcription Thymus Thymus
32 chr5:115421800-115428800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr5:115421800-115428800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr5:115421800-115448000 Weak transcription Aorta Aorta
35 chr5:115422000-115423800 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr5:115422000-115423800 Weak transcription Fetal Muscle Leg muscle
37 chr5:115422000-115423800 Weak transcription Fetal Thymus thymus
38 chr5:115422000-115424000 Weak transcription Primary hematopoietic stem cells blood
39 chr5:115422000-115424200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr5:115422000-115424200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr5:115422000-115424200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr5:115422000-115424200 Weak transcription Fetal Heart heart
43 chr5:115422000-115424200 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr5:115422000-115424200 Weak transcription Stomach Smooth Muscle stomach
45 chr5:115422000-115424400 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr5:115422000-115424600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr5:115422000-115424800 Weak transcription NHEK skin
48 chr5:115422000-115426000 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr5:115422000-115426000 Weak transcription Small Intestine intestine
50 chr5:115422000-115426200 Weak transcription Pancreatic Islets Pancreatic Islet

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