The 2.0 version of rSNPBase

Variant report

Variant rs12527291
Chromosome Location chr6:119298837-119298838
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119279800-119303600 Weak transcription Adipose Nuclei Adipose
2 chr6:119280000-119305200 Weak transcription Primary T cells from cord blood blood
3 chr6:119281600-119299400 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr6:119281600-119303200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr6:119283600-119302400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr6:119285200-119304400 Weak transcription Brain Inferior Temporal Lobe brain
7 chr6:119285800-119340000 Weak transcription Fetal Brain Male brain
8 chr6:119286000-119300000 Weak transcription Brain Anterior Caudate brain
9 chr6:119286000-119302800 Weak transcription Brain Angular Gyrus brain
10 chr6:119287200-119299400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr6:119287200-119305000 Weak transcription HepG2 liver
12 chr6:119287200-119326600 Weak transcription Fetal Brain Female brain
13 chr6:119287400-119330000 Weak transcription Fetal Muscle Leg muscle
14 chr6:119287600-119300200 Weak transcription Placenta Placenta
15 chr6:119288800-119299000 Weak transcription Fetal Intestine Small intestine
16 chr6:119288800-119315000 Weak transcription Fetal Intestine Large intestine
17 chr6:119289200-119304600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr6:119292400-119344000 Weak transcription Brain Germinal Matrix brain
19 chr6:119292800-119308600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr6:119293200-119345400 Weak transcription Lung lung
21 chr6:119293400-119306800 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr6:119293600-119299400 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr6:119293800-119299400 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr6:119294200-119330800 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr6:119295600-119307200 Weak transcription Brain Hippocampus Middle brain
26 chr6:119296200-119302200 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr6:119296400-119299200 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr6:119296400-119299200 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr6:119296400-119302400 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr6:119296800-119299600 Weak transcription K562 blood
31 chr6:119296800-119314600 Weak transcription Stomach Smooth Muscle stomach
32 chr6:119297400-119304400 Weak transcription Pancreas Pancrea
33 chr6:119298000-119300800 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr6:119298000-119301400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr6:119298200-119301400 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr6:119298200-119301400 Strong transcription Fetal Muscle Trunk muscle
37 chr6:119298800-119301200 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015