Variant report

Variant rs12533163
Chromosome Location chr7:5434783-5434784
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5413600-5435000 Weak transcription HSMM muscle
2 chr7:5423200-5435200 Strong transcription Fetal Intestine Large intestine
3 chr7:5423200-5436400 Weak transcription Right Atrium heart
4 chr7:5423400-5436400 Strong transcription Fetal Intestine Small intestine
5 chr7:5423400-5436400 Weak transcription Psoas Muscle Psoas
6 chr7:5423600-5434800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr7:5423600-5443600 Weak transcription Fetal Brain Male brain
8 chr7:5424000-5437600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr7:5424400-5439200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr7:5424800-5435400 Strong transcription Fetal Muscle Leg muscle
11 chr7:5424800-5436200 Strong transcription Fetal Stomach stomach
12 chr7:5424800-5447000 Weak transcription Fetal Heart heart
13 chr7:5425800-5435000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr7:5425800-5436200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr7:5425800-5447000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr7:5426000-5435000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr7:5426000-5435000 Strong transcription Sigmoid Colon Sigmoid Colon
18 chr7:5426000-5444200 Strong transcription Cortex derived primary cultured neurospheres brain
19 chr7:5426800-5435000 Strong transcription Right Ventricle heart
20 chr7:5427000-5446800 Weak transcription NH-A brain
21 chr7:5427400-5435000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr7:5427400-5437400 Weak transcription K562 blood
23 chr7:5427400-5445600 Weak transcription Fetal Kidney kidney
24 chr7:5427600-5434800 Weak transcription Stomach Mucosa stomach
25 chr7:5427600-5442800 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr7:5429000-5437000 Strong transcription Fetal Adrenal Gland Adrenal Gland
27 chr7:5429200-5444400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr7:5429600-5435000 Strong transcription Muscle Satellite Cultured Cells --
29 chr7:5429600-5435200 Strong transcription Placenta Amnion Placenta Amnion
30 chr7:5430000-5435000 Strong transcription Osteobl bone
31 chr7:5431000-5436600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr7:5431600-5435200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr7:5432800-5435000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr7:5433200-5445200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr7:5433400-5434800 Genic enhancers Primary T helper naive cells fromperipheralblood blood
36 chr7:5433400-5434800 Weak transcription Brain Anterior Caudate brain
37 chr7:5433400-5435400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
38 chr7:5433400-5436200 Weak transcription Small Intestine intestine
39 chr7:5433600-5435400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
40 chr7:5433800-5435000 Genic enhancers Primary T helper cells fromperipheralblood blood
41 chr7:5433800-5435200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
42 chr7:5433800-5435200 Genic enhancers Spleen Spleen
43 chr7:5433800-5436000 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr7:5433800-5436200 Weak transcription Brain Cingulate Gyrus brain
45 chr7:5433800-5437400 Weak transcription Brain Substantia Nigra brain
46 chr7:5434000-5434800 Weak transcription Primary hematopoietic stem cells blood
47 chr7:5434000-5434800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr7:5434000-5435000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr7:5434000-5435000 Genic enhancers Breast Myoepithelial Primary Cells Breast
50 chr7:5434000-5435000 Weak transcription Fetal Thymus thymus

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