The 2.0 version of rSNPBase

Variant report

Variant rs12538412
Chromosome Location chr7:37992761-37992762
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:37978400-37994200 Weak transcription Primary hematopoietic stem cells blood
2 chr7:37984000-37993200 Weak transcription Duodenum Mucosa Duodenum
3 chr7:37984200-37993600 Weak transcription Brain Angular Gyrus brain
4 chr7:37984400-37995000 Weak transcription Brain Hippocampus Middle brain
5 chr7:37984800-37993600 Weak transcription Brain Cingulate Gyrus brain
6 chr7:37986000-37993600 Weak transcription Fetal Brain Female brain
7 chr7:37986800-37993000 Strong transcription Aorta Aorta
8 chr7:37987400-37992800 Weak transcription Fetal Brain Male brain
9 chr7:37987400-37994200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr7:37987400-37997200 Weak transcription Psoas Muscle Psoas
11 chr7:37987800-37993000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr7:37987800-37993800 Strong transcription A549 lung
13 chr7:37987800-37996000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr7:37988000-37993400 Strong transcription Fetal Muscle Trunk muscle
15 chr7:37988400-37993600 Strong transcription HSMMtube muscle
16 chr7:37988600-37993000 Strong transcription Fetal Muscle Leg muscle
17 chr7:37988600-37993400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr7:37988600-37993600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr7:37989000-37993600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr7:37989400-37993400 Weak transcription Lung lung
21 chr7:37989400-37994600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr7:37989400-37998800 Weak transcription Thymus Thymus
23 chr7:37989800-37993800 Strong transcription HSMM muscle
24 chr7:37990200-37993200 Weak transcription Primary T cells from cord blood blood
25 chr7:37990200-37996000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr7:37990400-37993000 Genic enhancers Primary hematopoietic stem cells short term culture blood
27 chr7:37990600-37992800 Strong transcription Liver Liver
28 chr7:37991400-37992800 Enhancers Primary monocytes fromperipheralblood blood
29 chr7:37991600-37993000 Enhancers Primary neutrophils fromperipheralblood blood
30 chr7:37992200-37992800 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr7:37992200-37993200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr7:37992200-38017600 Weak transcription Ovary ovary
33 chr7:37992400-37994000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr7:37992400-37994800 Weak transcription Adipose Nuclei Adipose
35 chr7:37992400-37997400 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr7:37992400-37998200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr7:37992600-37994000 Weak transcription Dnd41 blood
38 chr7:37992600-37996000 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr7:37992600-37999200 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr7:37992600-38026800 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015