Variant report

Variant rs12539661
Chromosome Location chr7:17273816-17273817
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:17270000-17278800 Weak transcription Right Ventricle heart
2 chr7:17271000-17278800 Weak transcription Aorta Aorta
3 chr7:17271800-17279400 Weak transcription Left Ventricle heart
4 chr7:17272800-17275800 Enhancers Primary monocytes fromperipheralblood blood
5 chr7:17272800-17276200 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr7:17272800-17276400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr7:17273200-17274000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr7:17273200-17274000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
9 chr7:17273200-17274200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
10 chr7:17273200-17274600 Enhancers ES-I3 Cell Line embryonic stem cell
11 chr7:17273200-17274600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr7:17273200-17274600 Flanking Active TSS Dnd41 blood
13 chr7:17273200-17276800 Enhancers NH-A brain
14 chr7:17273400-17274000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
15 chr7:17273400-17274000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
16 chr7:17273400-17274000 Enhancers Right Atrium heart
17 chr7:17273400-17274000 Enhancers Sigmoid Colon Sigmoid Colon
18 chr7:17273400-17274000 Flanking Active TSS GM12878-XiMat blood
19 chr7:17273400-17274000 Enhancers K562 blood
20 chr7:17273400-17274200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
21 chr7:17273400-17274200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
22 chr7:17273400-17274200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr7:17273400-17274200 Enhancers Fetal Heart heart
24 chr7:17273400-17274200 Flanking Active TSS Osteobl bone
25 chr7:17273400-17274400 Enhancers Primary mononuclear cells fromperipheralblood Blood
26 chr7:17273400-17274600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr7:17273400-17274600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
28 chr7:17273400-17274600 Enhancers Colon Smooth Muscle Colon
29 chr7:17273400-17274800 Enhancers NHEK skin
30 chr7:17273400-17275000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
31 chr7:17273400-17275000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr7:17273400-17275000 Enhancers Adipose Nuclei Adipose
33 chr7:17273400-17275200 Enhancers Primary B cells from peripheral blood blood
34 chr7:17273400-17275800 Enhancers Placenta Placenta
35 chr7:17273400-17276200 Enhancers NHDF-Ad bronchial
36 chr7:17273400-17277000 Enhancers HUVEC blood vessel
37 chr7:17273600-17274000 Flanking Active TSS Primary hematopoietic stem cells blood
38 chr7:17273600-17274200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
39 chr7:17273600-17274200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr7:17273600-17274600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr7:17273600-17274600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
42 chr7:17273600-17275000 Enhancers HMEC breast
43 chr7:17273600-17275600 Enhancers Primary B cells from cord blood blood
44 chr7:17273800-17274000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr7:17273800-17274000 Flanking Active TSS Primary T cells from cord blood blood
46 chr7:17273800-17274000 Flanking Active TSS Primary T cells fromperipheralblood blood
47 chr7:17273800-17274000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
48 chr7:17273800-17274000 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
49 chr7:17273800-17274000 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
50 chr7:17273800-17274000 Flanking Active TSS Fetal Thymus thymus

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