The 2.0 version of rSNPBase

Variant report

Variant rs12542579
Chromosome Location chr8:68146139-68146140
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:68100800-68152600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr8:68103000-68151400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr8:68103600-68158200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr8:68104600-68193000 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr8:68104600-68215600 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr8:68104800-68151200 Strong transcription Primary T cells fromperipheralblood blood
7 chr8:68104800-68152000 Strong transcription Fetal Thymus thymus
8 chr8:68104800-68159600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr8:68104800-68182400 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr8:68105000-68184400 Strong transcription Primary monocytes fromperipheralblood blood
11 chr8:68105600-68158800 Strong transcription Primary T regulatory cells fromperipheralblood blood
12 chr8:68113000-68172600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr8:68117000-68154200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr8:68119000-68157200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr8:68127600-68148800 Weak transcription NHEK skin
16 chr8:68128000-68154200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr8:68128200-68148800 Weak transcription Pancreas Pancrea
18 chr8:68129000-68154000 Weak transcription Gastric stomach
19 chr8:68130400-68148800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr8:68135000-68151400 Strong transcription Primary hematopoietic stem cells blood
21 chr8:68135200-68156000 Strong transcription Primary T helper cells PMA-I stimulated --
22 chr8:68135200-68184400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr8:68135600-68146200 Weak transcription HepG2 liver
24 chr8:68135800-68147600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr8:68135800-68148200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr8:68135800-68154000 Weak transcription Esophagus oesophagus
27 chr8:68136000-68149000 Weak transcription Fetal Heart heart
28 chr8:68136000-68154000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr8:68136000-68154800 Weak transcription Stomach Mucosa stomach
30 chr8:68136200-68147600 Weak transcription Fetal Stomach stomach
31 chr8:68136200-68147800 Weak transcription Lung lung
32 chr8:68136200-68154000 Weak transcription Spleen Spleen
33 chr8:68136600-68148800 Weak transcription Brain Hippocampus Middle brain
34 chr8:68136800-68148800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr8:68136800-68148800 Weak transcription Brain Cingulate Gyrus brain
36 chr8:68139000-68149200 Weak transcription Psoas Muscle Psoas
37 chr8:68139000-68154000 Weak transcription Brain Inferior Temporal Lobe brain
38 chr8:68139000-68178000 Weak transcription Small Intestine intestine
39 chr8:68139200-68148800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr8:68139200-68148800 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr8:68139200-68154200 Weak transcription Aorta Aorta
42 chr8:68139200-68155000 Weak transcription Placenta Amnion Placenta Amnion
43 chr8:68139400-68148200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr8:68139600-68147800 Weak transcription Thymus Thymus
45 chr8:68139600-68148600 Weak transcription H9 Cell Line embryonic stem cell
46 chr8:68139600-68148800 Weak transcription Colon Smooth Muscle Colon
47 chr8:68139600-68149400 Weak transcription NHLF lung
48 chr8:68139600-68153800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr8:68139600-68154000 Weak transcription Fetal Brain Female brain
50 chr8:68139600-68161400 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015