The 2.0 version of rSNPBase

Variant report

Variant rs12546487
Chromosome Location chr8:1928174-1928175
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:1922600-1928600 Weak transcription Spleen Spleen
2 chr8:1922800-1928800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr8:1923200-1928800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr8:1923400-1928200 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr8:1923800-1928800 Weak transcription Right Atrium heart
6 chr8:1923800-1939800 Weak transcription Colonic Mucosa Colon
7 chr8:1924000-1939600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr8:1924200-1928600 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr8:1924200-1929800 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr8:1924400-1928600 Weak transcription Fetal Stomach stomach
11 chr8:1924400-1928800 Weak transcription Brain Substantia Nigra brain
12 chr8:1924400-1928800 Weak transcription Fetal Muscle Leg muscle
13 chr8:1924400-1929000 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr8:1924400-1929000 Weak transcription Brain Hippocampus Middle brain
15 chr8:1924400-1929000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr8:1924400-1929000 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr8:1924400-1931200 Weak transcription Pancreas Pancrea
18 chr8:1924400-1939200 Weak transcription Duodenum Mucosa Duodenum
19 chr8:1924800-1928800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr8:1924800-1928800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr8:1924800-1936800 Weak transcription Brain Angular Gyrus brain
22 chr8:1925000-1928800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr8:1925000-1933800 Weak transcription Brain Anterior Caudate brain
24 chr8:1925200-1928600 Weak transcription Brain Germinal Matrix brain
25 chr8:1925200-1928800 Weak transcription Fetal Intestine Large intestine
26 chr8:1925200-1929000 Weak transcription Fetal Brain Female brain
27 chr8:1926200-1929800 Enhancers Thymus Thymus
28 chr8:1926400-1928800 Strong transcription Fetal Intestine Small intestine
29 chr8:1926400-1928800 Enhancers Dnd41 blood
30 chr8:1926800-1931200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr8:1927200-1928600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr8:1927200-1931800 Enhancers Fetal Thymus thymus
33 chr8:1927800-1928600 Enhancers Skeletal Muscle Female skeletal muscle
34 chr8:1927800-1928600 Enhancers Monocytes-CD14+_RO01746 blood
35 chr8:1927800-1928800 Enhancers Primary T helper naive cells from peripheral blood blood
36 chr8:1927800-1929200 Enhancers Primary Natural Killer cells fromperipheralblood blood
37 chr8:1927800-1930400 Enhancers Primary T cells fromperipheralblood blood
38 chr8:1928000-1928200 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr8:1928000-1928200 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
40 chr8:1928000-1928400 Enhancers Fetal Heart heart
41 chr8:1928000-1928800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
42 chr8:1928000-1929000 Enhancers Primary T cells from cord blood blood
43 chr8:1928000-1929000 Enhancers Primary T helper 17 cells PMA-I stimulated --
44 chr8:1928000-1929000 Enhancers Left Ventricle heart
45 chr8:1928000-1929200 Enhancers Primary monocytes fromperipheralblood blood
46 chr8:1928000-1930800 Enhancers Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015