Variant report

Variant	rs12548341
Chromosome Location	chr8:110821596-110821597
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10505129	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1471716	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1484015	0.81[AFR][1000 genomes]
rs2086804	0.81[ASN][1000 genomes]
rs2086805	0.80[ASN][1000 genomes]
rs2882414	0.80[ASN][1000 genomes]
rs3102249	0.82[ASN][1000 genomes]
rs4504598	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60501232	0.81[AFR][1000 genomes]
rs7831835	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv611880	chr8:110762913-110821596	Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110820200-110823000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:110820600-110821800	Enhancers	Fetal Lung	lung
3	chr8:110821000-110823600	Enhancers	Fetal Brain Male	brain
4	chr8:110821400-110823200	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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