Variant report

Variant rs12550889
Chromosome Location chr9:139756883-139756884
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139744600-139757200 Weak transcription Primary hematopoietic stem cells blood
2 chr9:139744800-139757800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr9:139744800-139758200 Weak transcription Fetal Kidney kidney
4 chr9:139745000-139757400 Weak transcription HSMMtube muscle
5 chr9:139745000-139757600 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr9:139745000-139759400 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr9:139745200-139757800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr9:139745200-139759400 Weak transcription Right Atrium heart
9 chr9:139746000-139759400 Weak transcription Psoas Muscle Psoas
10 chr9:139751000-139759000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr9:139751400-139759400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr9:139751600-139758600 Genic enhancers Pancreas Pancrea
13 chr9:139752000-139758800 Strong transcription Fetal Brain Female brain
14 chr9:139752200-139757000 Genic enhancers Fetal Intestine Small intestine
15 chr9:139752200-139758200 Strong transcription Brain Germinal Matrix brain
16 chr9:139753200-139758600 Strong transcription Thymus Thymus
17 chr9:139753200-139759000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr9:139753200-139759200 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr9:139753200-139759400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr9:139753400-139757200 Weak transcription Small Intestine intestine
21 chr9:139753600-139758600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr9:139753600-139759000 Strong transcription HUES48 Cell Line embryonic stem cell
23 chr9:139753800-139758400 Strong transcription Brain Anterior Caudate brain
24 chr9:139753800-139758600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
25 chr9:139753800-139759000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr9:139753800-139759000 Strong transcription Placenta Amnion Placenta Amnion
27 chr9:139754000-139758400 Strong transcription Lung lung
28 chr9:139754000-139759200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr9:139754200-139758000 Weak transcription Fetal Brain Male brain
30 chr9:139754200-139758200 Strong transcription Right Ventricle heart
31 chr9:139754200-139758800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr9:139754200-139758800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr9:139754200-139758800 Strong transcription Fetal Adrenal Gland Adrenal Gland
34 chr9:139754400-139758600 Strong transcription Fetal Stomach stomach
35 chr9:139754400-139758800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr9:139754400-139759400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr9:139754600-139758000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr9:139754600-139758200 Strong transcription Brain Cingulate Gyrus brain
39 chr9:139754600-139758600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr9:139754600-139759400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr9:139754600-139759400 Strong transcription NHLF lung
42 chr9:139754800-139758200 Strong transcription Adipose Nuclei Adipose
43 chr9:139754800-139758600 Strong transcription Primary neutrophils fromperipheralblood blood
44 chr9:139754800-139758600 Strong transcription Brain Inferior Temporal Lobe brain
45 chr9:139754800-139759400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr9:139755000-139757600 Strong transcription Primary T helper cells fromperipheralblood blood
47 chr9:139755000-139758200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr9:139755000-139758200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
49 chr9:139755000-139758200 Strong transcription HepG2 liver
50 chr9:139755000-139758400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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