Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10511430	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10756255	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10809357	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10809358	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10809492	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10809506	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10959533	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10959546	0.91[ASN][1000 genomes]
rs10959548	0.91[ASN][1000 genomes]
rs10959853	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10959887	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12375687	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1337619	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1337627	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28712838	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4578005	0.82[ASN][1000 genomes]
rs57523908	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs62532319	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7036346	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7856751	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7860419	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv592085	chr3:155827634-156012679	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1014755	chr3:155889430-156411894	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:155870400-155917800	Weak transcription	Aorta	Aorta
2	chr3:155905800-155919200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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