Variant report

Variant rs12565949
Chromosome Location chr1:95171356-95171357
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95152800-95195000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr1:95153000-95173000 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:95155800-95173200 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr1:95164800-95174000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:95165000-95173200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:95165000-95175400 Weak transcription NH-A brain
7 chr1:95166000-95171400 Weak transcription Right Atrium heart
8 chr1:95166200-95174200 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:95168200-95171400 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr1:95168200-95171400 Weak transcription Stomach Mucosa stomach
11 chr1:95168200-95173000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:95168200-95173000 Weak transcription Fetal Muscle Trunk muscle
13 chr1:95168200-95174200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr1:95168200-95174200 Weak transcription Spleen Spleen
15 chr1:95168200-95178800 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr1:95168200-95179600 Weak transcription Placenta Placenta
17 chr1:95168200-95179800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:95168200-95200400 Weak transcription Pancreas Pancrea
19 chr1:95168400-95171400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:95168400-95171400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:95168400-95172200 Weak transcription Fetal Kidney kidney
22 chr1:95168400-95172400 Weak transcription Gastric stomach
23 chr1:95168400-95172400 Weak transcription NHLF lung
24 chr1:95168400-95173000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:95168400-95174000 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:95168400-95174000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:95168400-95174200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:95168400-95178400 Weak transcription Primary hematopoietic stem cells blood
29 chr1:95168400-95179400 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr1:95168600-95171400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:95168600-95174200 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:95168800-95171400 Weak transcription Adipose Nuclei Adipose
33 chr1:95169400-95200400 Weak transcription Colonic Mucosa Colon
34 chr1:95170200-95176800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:95170600-95172000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:95170600-95174400 Enhancers HSMM muscle
37 chr1:95170800-95171400 Enhancers Brain Hippocampus Middle brain
38 chr1:95170800-95172000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:95170800-95172600 Enhancers Fetal Intestine Large intestine
40 chr1:95170800-95172600 Enhancers Fetal Intestine Small intestine
41 chr1:95170800-95173400 Enhancers Ovary ovary
42 chr1:95171000-95171800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:95171000-95171800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
44 chr1:95171000-95171800 Enhancers HepG2 liver
45 chr1:95171000-95172600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:95171000-95173400 Enhancers Muscle Satellite Cultured Cells --
47 chr1:95171000-95173400 Enhancers HSMMtube muscle
48 chr1:95171000-95173400 Enhancers Osteobl bone
49 chr1:95171000-95177200 Enhancers NHDF-Ad bronchial
50 chr1:95171200-95171400 Enhancers Aorta Aorta

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