The 2.0 version of rSNPBase

Variant report

Variant rs12568313
Chromosome Location chr1:147116592-147116593
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:147091800-147119800 Weak transcription Hela-S3 cervix
2 chr1:147092800-147117600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr1:147096600-147122800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:147096800-147117000 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr1:147096800-147117200 Weak transcription Brain Hippocampus Middle brain
6 chr1:147096800-147119400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:147096800-147119400 Weak transcription Aorta Aorta
8 chr1:147096800-147119600 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr1:147096800-147119600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:147096800-147119600 Weak transcription Gastric stomach
11 chr1:147096800-147119600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:147096800-147119800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:147097600-147130000 Weak transcription Stomach Mucosa stomach
14 chr1:147097800-147119800 Weak transcription Brain Substantia Nigra brain
15 chr1:147097800-147124000 Weak transcription Small Intestine intestine
16 chr1:147098000-147119800 Weak transcription Brain Germinal Matrix brain
17 chr1:147098600-147117000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:147099400-147119200 Weak transcription Fetal Intestine Large intestine
19 chr1:147102400-147117200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:147102800-147120800 Weak transcription Muscle Satellite Cultured Cells --
21 chr1:147104800-147119200 Weak transcription Pancreas Pancrea
22 chr1:147107400-147118200 Weak transcription Primary B cells from cord blood blood
23 chr1:147109400-147124000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:147111000-147117600 Weak transcription Brain Cingulate Gyrus brain
25 chr1:147111000-147128400 Weak transcription HUVEC blood vessel
26 chr1:147112600-147117200 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr1:147112600-147119600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr1:147112600-147124000 Weak transcription HSMMtube muscle
29 chr1:147112800-147122200 Weak transcription Psoas Muscle Psoas
30 chr1:147113000-147119200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:147113000-147119600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:147113000-147136200 Weak transcription NH-A brain
33 chr1:147113000-147141400 Weak transcription Fetal Brain Male brain
34 chr1:147113200-147117400 Weak transcription Brain Angular Gyrus brain
35 chr1:147113200-147122600 Weak transcription HMEC breast
36 chr1:147113200-147130800 Weak transcription NHEK skin
37 chr1:147113400-147118600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr1:147113400-147119400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:147113400-147119600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:147113400-147121800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:147113400-147122400 Weak transcription Fetal Lung lung
42 chr1:147113600-147116600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:147113600-147118800 Weak transcription H1 Cell Line embryonic stem cell
44 chr1:147113600-147119000 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr1:147113600-147119400 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr1:147113600-147121800 Weak transcription Colon Smooth Muscle Colon
47 chr1:147113800-147117200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:147113800-147117400 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr1:147113800-147117400 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr1:147113800-147117600 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015