Variant report

Variant rs12570924
Chromosome Location chr10:466396-466397
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:395800-489400 Weak transcription Stomach Mucosa stomach
2 chr10:423600-480200 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr10:436600-480200 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr10:436600-521200 Weak transcription HepG2 liver
5 chr10:436800-468000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr10:436800-469000 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr10:441600-466600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr10:443400-497000 Weak transcription Psoas Muscle Psoas
9 chr10:445800-498400 Weak transcription Rectal Smooth Muscle rectum
10 chr10:449600-469200 Strong transcription Stomach Smooth Muscle stomach
11 chr10:450600-469800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr10:450600-469800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr10:453400-485600 Weak transcription Fetal Kidney kidney
14 chr10:453600-468200 Weak transcription Spleen Spleen
15 chr10:453600-468400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr10:453600-469800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr10:454200-469800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr10:455000-471800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr10:455000-480200 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr10:455800-468000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr10:456000-496600 Weak transcription Fetal Heart heart
22 chr10:456200-483200 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr10:456600-469800 Strong transcription Fetal Stomach stomach
24 chr10:457600-466600 Strong transcription Ovary ovary
25 chr10:458000-469800 Strong transcription Adipose Nuclei Adipose
26 chr10:458400-468800 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr10:458800-469800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr10:458800-470800 Weak transcription HSMM muscle
29 chr10:458800-471200 Weak transcription NH-A brain
30 chr10:459200-470000 Weak transcription Small Intestine intestine
31 chr10:459600-466800 Strong transcription Cortex derived primary cultured neurospheres brain
32 chr10:459800-466800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr10:460000-466800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr10:460000-468000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr10:460000-468800 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr10:460400-469200 Strong transcription Fetal Intestine Small intestine
37 chr10:460400-482200 Weak transcription Esophagus oesophagus
38 chr10:461400-469800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr10:461800-466800 Genic enhancers Fetal Muscle Leg muscle
40 chr10:462200-468800 Strong transcription Duodenum Smooth Muscle Duodenum
41 chr10:462200-473800 Weak transcription A549 lung
42 chr10:462400-468600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr10:462400-468600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr10:462400-468800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr10:462400-469000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr10:462600-469800 Strong transcription Fetal Brain Female brain
47 chr10:463000-466600 Strong transcription Gastric stomach
48 chr10:463000-468800 Strong transcription Brain Anterior Caudate brain
49 chr10:463000-469800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr10:463200-468800 Strong transcription Brain Cingulate Gyrus brain

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