Variant report

Variant rs1257106
Chromosome Location chr2:97761641-97761642
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:97760800-97762000 Enhancers Fetal Brain Male brain
2 chr2:97761000-97761800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
3 chr2:97761000-97761800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
4 chr2:97761000-97761800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr2:97761000-97761800 Flanking Active TSS Brain Angular Gyrus brain
6 chr2:97761000-97761800 Flanking Active TSS Fetal Brain Female brain
7 chr2:97761000-97761800 Enhancers Gastric stomach
8 chr2:97761000-97761800 Enhancers Stomach Mucosa stomach
9 chr2:97761000-97761800 Enhancers NHDF-Ad bronchial
10 chr2:97761200-97761800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr2:97761200-97761800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:97761200-97761800 Enhancers Primary T cells fromperipheralblood blood
13 chr2:97761200-97761800 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr2:97761200-97761800 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
15 chr2:97761200-97761800 Enhancers Esophagus oesophagus
16 chr2:97761200-97761800 Enhancers Ovary ovary
17 chr2:97761200-97761800 Enhancers Right Ventricle heart
18 chr2:97761200-97762000 Enhancers Pancreas Pancrea
19 chr2:97761400-97761800 Flanking Active TSS H1 Cell Line embryonic stem cell
20 chr2:97761400-97761800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
21 chr2:97761400-97761800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
22 chr2:97761400-97761800 Enhancers Primary hematopoietic stem cells blood
23 chr2:97761400-97761800 Enhancers Primary hematopoietic stem cells short term culture blood
24 chr2:97761400-97761800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
25 chr2:97761400-97761800 Enhancers Adipose Nuclei Adipose
26 chr2:97761400-97761800 Enhancers Brain Cingulate Gyrus brain
27 chr2:97761400-97761800 Enhancers Brain Germinal Matrix brain
28 chr2:97761400-97761800 Enhancers Colonic Mucosa Colon
29 chr2:97761400-97761800 Enhancers Duodenum Smooth Muscle Duodenum
30 chr2:97761400-97761800 Enhancers Fetal Intestine Small intestine
31 chr2:97761400-97761800 Enhancers Fetal Muscle Leg muscle
32 chr2:97761400-97761800 Enhancers Fetal Stomach stomach
33 chr2:97761400-97761800 Enhancers Lung lung
34 chr2:97761400-97761800 Enhancers Right Atrium heart
35 chr2:97761400-97761800 Enhancers Spleen Spleen
36 chr2:97761400-97761800 Enhancers GM12878-XiMat blood
37 chr2:97761400-97762000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr2:97761400-97762600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr2:97761600-97761800 Enhancers H9 Cell Line embryonic stem cell
40 chr2:97761600-97761800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr2:97761600-97761800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr2:97761600-97761800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
43 chr2:97761600-97761800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr2:97761600-97761800 Enhancers Brain Anterior Caudate brain
45 chr2:97761600-97761800 Enhancers Brain Hippocampus Middle brain
46 chr2:97761600-97761800 Enhancers Brain Inferior Temporal Lobe brain
47 chr2:97761600-97761800 Enhancers Brain Substantia Nigra brain
48 chr2:97761600-97761800 Enhancers Colon Smooth Muscle Colon
49 chr2:97761600-97761800 Active TSS Fetal Heart heart
50 chr2:97761600-97761800 Enhancers Fetal Kidney kidney

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