Variant report

Variant rs12573549
Chromosome Location chr10:607570-607571
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:600400-608000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr10:600600-608000 Enhancers Left Ventricle heart
3 chr10:601000-610000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr10:601600-613600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr10:602400-609600 Enhancers Brain Substantia Nigra brain
6 chr10:602600-609200 Enhancers Fetal Muscle Leg muscle
7 chr10:603600-609800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr10:604000-609400 Enhancers Fetal Brain Male brain
9 chr10:604200-607600 Weak transcription Adipose Nuclei Adipose
10 chr10:604400-607800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr10:604400-608800 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr10:604600-609000 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr10:605200-608200 Enhancers Brain Angular Gyrus brain
14 chr10:605200-608200 Enhancers Pancreas Pancrea
15 chr10:605200-609600 Enhancers Colon Smooth Muscle Colon
16 chr10:605400-608000 Weak transcription Fetal Heart heart
17 chr10:605400-608200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
18 chr10:605400-608200 Enhancers Brain Anterior Caudate brain
19 chr10:605600-608200 Enhancers Right Ventricle heart
20 chr10:605600-608600 Enhancers Pancreatic Islets Pancreatic Islet
21 chr10:605600-608800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr10:605600-609200 Enhancers Brain Cingulate Gyrus brain
23 chr10:605800-608600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr10:605800-608800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr10:605800-610000 Weak transcription Fetal Stomach stomach
26 chr10:606000-608000 Weak transcription Fetal Brain Female brain
27 chr10:606000-608200 Enhancers Fetal Kidney kidney
28 chr10:606200-607600 Weak transcription Fetal Intestine Small intestine
29 chr10:606200-608800 Weak transcription Psoas Muscle Psoas
30 chr10:606400-611800 Weak transcription HepG2 liver
31 chr10:606600-608200 Enhancers Right Atrium heart
32 chr10:606600-609200 Enhancers Stomach Smooth Muscle stomach
33 chr10:606600-618200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr10:606800-607800 Enhancers Gastric stomach
35 chr10:606800-609000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr10:606800-609000 Weak transcription Brain Germinal Matrix brain
37 chr10:606800-609000 Weak transcription Lung lung
38 chr10:606800-609200 Enhancers Brain Hippocampus Middle brain
39 chr10:607000-611000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr10:607200-608000 Enhancers Fetal Muscle Trunk muscle
41 chr10:607200-608200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr10:607400-607800 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr10:607400-608000 Enhancers Ovary ovary
44 chr10:607400-608000 Enhancers Spleen Spleen
45 chr10:607400-608400 Enhancers Brain Inferior Temporal Lobe brain
46 chr10:607400-609000 Enhancers HSMMtube muscle
47 chr10:607400-609200 Enhancers Rectal Smooth Muscle rectum

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