Variant report

Variant rs12579948
Chromosome Location chr12:48339295-48339296
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48332600-48339600 Weak transcription NHDF-Ad bronchial
2 chr12:48332800-48340200 Weak transcription Right Atrium heart
3 chr12:48335800-48346000 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr12:48336200-48340200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr12:48336200-48340400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr12:48336600-48340200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr12:48336600-48341200 Enhancers Rectal Mucosa Donor 29 rectum
8 chr12:48336600-48343200 Weak transcription Right Ventricle heart
9 chr12:48336800-48339600 Weak transcription HSMMtube muscle
10 chr12:48337200-48340400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr12:48337600-48339600 Enhancers Hela-S3 cervix
12 chr12:48337800-48339600 Weak transcription Fetal Heart heart
13 chr12:48337800-48340200 Enhancers Duodenum Mucosa Duodenum
14 chr12:48337800-48343200 Weak transcription Pancreas Pancrea
15 chr12:48338000-48339800 Weak transcription Fetal Intestine Small intestine
16 chr12:48338000-48339800 Weak transcription A549 lung
17 chr12:48338200-48340600 Weak transcription Fetal Intestine Large intestine
18 chr12:48338400-48340600 Enhancers NHEK skin
19 chr12:48338400-48342400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr12:48338400-48348800 Enhancers HMEC breast
21 chr12:48338800-48339400 Weak transcription Colonic Mucosa Colon
22 chr12:48338800-48340000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr12:48338800-48340200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr12:48338800-48340200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr12:48338800-48340400 Weak transcription Spleen Spleen
26 chr12:48338800-48340600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr12:48338800-48341600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr12:48338800-48341600 Enhancers Fetal Kidney kidney
29 chr12:48338800-48341600 Enhancers Placenta Placenta
30 chr12:48338800-48343200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
31 chr12:48339000-48340400 Weak transcription Esophagus oesophagus
32 chr12:48339000-48341800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr12:48339200-48340200 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr12:48339200-48340400 Enhancers HSMM muscle
35 chr12:48339200-48342400 Weak transcription Rectal Mucosa Donor 31 rectum

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