The 2.0 version of rSNPBase

Variant report

Variant rs1258051
Chromosome Location chr1:47023008-47023009
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46999600-47035000 Weak transcription Right Atrium heart
2 chr1:47014000-47026600 Weak transcription Primary B cells from peripheral blood blood
3 chr1:47015400-47024600 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr1:47015600-47024000 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr1:47015600-47024200 Weak transcription Primary hematopoietic stem cells blood
6 chr1:47015600-47025800 Weak transcription Colon Smooth Muscle Colon
7 chr1:47015800-47023400 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr1:47015800-47023800 Weak transcription Brain Cingulate Gyrus brain
9 chr1:47015800-47023800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr1:47015800-47024600 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr1:47015800-47026200 Weak transcription Primary B cells from cord blood blood
12 chr1:47015800-47041200 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:47015800-47043400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr1:47016000-47023200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:47016000-47025200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:47016000-47025600 Weak transcription Fetal Brain Female brain
17 chr1:47016000-47027000 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:47016000-47037400 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr1:47016200-47026000 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr1:47016200-47030400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:47016400-47023600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr1:47016400-47025600 Weak transcription Brain Anterior Caudate brain
23 chr1:47016600-47023400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr1:47016800-47034800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr1:47017600-47039800 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr1:47017800-47024200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr1:47018600-47023200 Weak transcription Fetal Muscle Leg muscle
28 chr1:47018600-47023200 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr1:47019000-47026200 Weak transcription HepG2 liver
30 chr1:47019200-47023800 Weak transcription Colonic Mucosa Colon
31 chr1:47019200-47024200 Weak transcription Duodenum Mucosa Duodenum
32 chr1:47019400-47023200 Weak transcription Fetal Thymus thymus
33 chr1:47019400-47023200 Weak transcription Stomach Smooth Muscle stomach
34 chr1:47019400-47023400 Weak transcription Primary T cells fromperipheralblood blood
35 chr1:47019400-47024200 Weak transcription Brain Hippocampus Middle brain
36 chr1:47019600-47032800 Weak transcription Small Intestine intestine
37 chr1:47019800-47043600 Weak transcription Dnd41 blood
38 chr1:47020000-47023200 Weak transcription Primary monocytes fromperipheralblood blood
39 chr1:47020200-47023200 Weak transcription Ovary ovary
40 chr1:47020400-47023200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:47020400-47023400 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr1:47020400-47023600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:47020600-47023600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:47020600-47023600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr1:47020600-47025600 Weak transcription Brain Inferior Temporal Lobe brain
46 chr1:47020600-47026200 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr1:47020600-47031200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:47020800-47047400 Weak transcription Brain Germinal Matrix brain
49 chr1:47021000-47023200 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr1:47021000-47023200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015