The 2.0 version of rSNPBase

Variant report

Variant rs12609493
Chromosome Location chr19:44151885-44151886
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44144400-44153000 Weak transcription Aorta Aorta
2 chr19:44144600-44162200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr19:44144800-44152400 Weak transcription Colonic Mucosa Colon
4 chr19:44144800-44152400 Weak transcription Dnd41 blood
5 chr19:44144800-44156000 Weak transcription K562 blood
6 chr19:44144800-44156800 Weak transcription Right Atrium heart
7 chr19:44145000-44152000 Weak transcription NHEK skin
8 chr19:44145000-44152400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr19:44145000-44152400 Weak transcription Gastric stomach
10 chr19:44145000-44152400 Weak transcription Left Ventricle heart
11 chr19:44145000-44152400 Weak transcription Ovary ovary
12 chr19:44145000-44152400 Weak transcription Right Ventricle heart
13 chr19:44145000-44152400 Weak transcription HMEC breast
14 chr19:44145000-44152400 Weak transcription NHLF lung
15 chr19:44145000-44152600 Weak transcription Hela-S3 cervix
16 chr19:44145000-44152800 Weak transcription Spleen Spleen
17 chr19:44145000-44155600 Weak transcription Pancreas Pancrea
18 chr19:44145000-44156000 Weak transcription Brain Inferior Temporal Lobe brain
19 chr19:44145000-44156000 Weak transcription Colon Smooth Muscle Colon
20 chr19:44145000-44156200 Weak transcription Brain Anterior Caudate brain
21 chr19:44145000-44156200 Weak transcription Brain Cingulate Gyrus brain
22 chr19:44145000-44156400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr19:44145000-44158400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr19:44145000-44167400 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr19:44145000-44168000 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr19:44145000-44171400 Weak transcription Fetal Heart heart
27 chr19:44145000-44171600 Weak transcription Esophagus oesophagus
28 chr19:44145200-44162200 Weak transcription Brain Germinal Matrix brain
29 chr19:44145400-44171200 Weak transcription Fetal Brain Female brain
30 chr19:44145800-44152400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr19:44145800-44153200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr19:44146000-44152800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr19:44146000-44156200 Weak transcription Rectal Smooth Muscle rectum
34 chr19:44146400-44152000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr19:44146400-44152200 Weak transcription Placenta Placenta
36 chr19:44146400-44155800 Weak transcription Brain Hippocampus Middle brain
37 chr19:44147000-44155600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr19:44147000-44156000 Weak transcription Brain Angular Gyrus brain
39 chr19:44147000-44156200 Weak transcription Stomach Mucosa stomach
40 chr19:44147200-44152200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr19:44147600-44152600 Weak transcription Duodenum Mucosa Duodenum
42 chr19:44147800-44152400 Weak transcription HUVEC blood vessel
43 chr19:44147800-44155800 Weak transcription Primary T cells from cord blood blood
44 chr19:44147800-44159600 Weak transcription HSMMtube muscle
45 chr19:44148000-44159800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr19:44148200-44158800 Weak transcription Small Intestine intestine
47 chr19:44148400-44152600 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr19:44148400-44160000 Weak transcription Fetal Thymus thymus
49 chr19:44148600-44152400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr19:44148800-44153000 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015