Variant report

Variant rs12609935
Chromosome Location chr19:23842501-23842502
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23832600-23865800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:23833400-23849800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:23833800-23849600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:23834000-23842600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
5 chr19:23835000-23846000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr19:23835200-23843000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr19:23835200-23843200 ZNF genes & repeats Brain Germinal Matrix brain
8 chr19:23835200-23845200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
9 chr19:23835200-23845600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
10 chr19:23835200-23846400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr19:23835200-23846600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr19:23835200-23847400 ZNF genes & repeats Fetal Lung lung
13 chr19:23835200-23849800 ZNF genes & repeats Primary T cells from cord blood blood
14 chr19:23835200-23850400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
15 chr19:23835200-23856600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
16 chr19:23835200-23857200 ZNF genes & repeats Fetal Brain Female brain
17 chr19:23835400-23842800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
18 chr19:23835400-23846000 ZNF genes & repeats A549 lung
19 chr19:23835400-23846600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
20 chr19:23835400-23849800 ZNF genes & repeats Primary B cells from peripheral blood blood
21 chr19:23835400-23849800 ZNF genes & repeats Liver Liver
22 chr19:23835400-23849800 ZNF genes & repeats Dnd41 blood
23 chr19:23835400-23849800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
24 chr19:23835400-23850000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr19:23835800-23849800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
26 chr19:23836000-23843000 ZNF genes & repeats Adipose Nuclei Adipose
27 chr19:23836000-23843600 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
28 chr19:23836000-23846800 ZNF genes & repeats Duodenum Mucosa Duodenum
29 chr19:23836000-23847000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr19:23836200-23842600 Strong transcription Left Ventricle heart
31 chr19:23836200-23842800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr19:23836200-23846000 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
33 chr19:23836200-23847400 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
34 chr19:23836200-23847600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
35 chr19:23836200-23849800 ZNF genes & repeats Primary hematopoietic stem cells blood
36 chr19:23836200-23850000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
37 chr19:23836400-23843200 Strong transcription Fetal Thymus thymus
38 chr19:23836400-23847200 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
39 chr19:23836400-23847200 ZNF genes & repeats GM12878-XiMat blood
40 chr19:23836400-23848000 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
41 chr19:23837000-23847600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr19:23837200-23848200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr19:23837400-23842600 Weak transcription Brain Substantia Nigra brain
44 chr19:23837400-23843800 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr19:23837600-23845800 Strong transcription Brain Hippocampus Middle brain
46 chr19:23837600-23846000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
47 chr19:23837600-23846600 ZNF genes & repeats Thymus Thymus
48 chr19:23838000-23843000 Strong transcription Placenta Amnion Placenta Amnion
49 chr19:23838400-23842600 Weak transcription Right Ventricle heart
50 chr19:23838600-23844400 Weak transcription Fetal Heart heart

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