Variant report

Variant rs12611109
Chromosome Location chr19:41714365-41714366
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41699600-41724400 Weak transcription Right Atrium heart
2 chr19:41700000-41722200 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr19:41700000-41724400 Weak transcription Placenta Amnion Placenta Amnion
4 chr19:41700200-41724200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:41700600-41714600 Weak transcription Spleen Spleen
6 chr19:41701600-41714600 Strong transcription Fetal Intestine Small intestine
7 chr19:41701800-41714400 Strong transcription HUES6 Cell Line embryonic stem cell
8 chr19:41701800-41714800 Strong transcription HUES48 Cell Line embryonic stem cell
9 chr19:41702000-41722400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr19:41703000-41714600 Strong transcription H1 Cell Line embryonic stem cell
11 chr19:41707800-41723600 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr19:41710200-41716800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr19:41710400-41722400 Weak transcription HepG2 liver
14 chr19:41713000-41714400 Weak transcription Lung lung
15 chr19:41713000-41716800 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr19:41713000-41722800 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr19:41713200-41724800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr19:41713400-41714400 Enhancers Stomach Mucosa stomach
19 chr19:41713400-41719400 Weak transcription NHEK skin
20 chr19:41713400-41723800 Weak transcription Esophagus oesophagus
21 chr19:41713600-41716000 Weak transcription Primary monocytes fromperipheralblood blood
22 chr19:41713600-41716400 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr19:41713600-41718800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr19:41713600-41723800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr19:41713800-41714600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr19:41713800-41714600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr19:41713800-41716600 Weak transcription Duodenum Mucosa Duodenum
28 chr19:41713800-41719400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr19:41713800-41719800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr19:41713800-41722000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr19:41713800-41722400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr19:41713800-41722400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr19:41713800-41722400 Weak transcription Fetal Intestine Large intestine
34 chr19:41713800-41722400 Weak transcription Fetal Muscle Leg muscle
35 chr19:41713800-41722600 Weak transcription A549 lung
36 chr19:41713800-41723800 Weak transcription H9 Cell Line embryonic stem cell
37 chr19:41713800-41723800 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr19:41713800-41724200 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr19:41713800-41724400 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr19:41713800-41724400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr19:41714000-41724400 Weak transcription iPS-20b Cell Line embryonic stem cell

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