The 2.0 version of rSNPBase

Variant report

Variant rs12617697
Chromosome Location chr2:32898020-32898021
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32853600-32934600 Weak transcription Small Intestine intestine
2 chr2:32855000-32913600 Weak transcription HMEC breast
3 chr2:32860600-32932000 Weak transcription Aorta Aorta
4 chr2:32865600-32907400 Weak transcription Rectal Smooth Muscle rectum
5 chr2:32866600-32903400 Weak transcription HUVEC blood vessel
6 chr2:32866800-32907600 Weak transcription Placenta Amnion Placenta Amnion
7 chr2:32868000-32899800 Weak transcription H1 Cell Line embryonic stem cell
8 chr2:32868200-32915200 Weak transcription Brain Angular Gyrus brain
9 chr2:32868400-32900400 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr2:32868400-32922400 Weak transcription HSMMtube muscle
11 chr2:32868400-32950600 Weak transcription Esophagus oesophagus
12 chr2:32868800-32912400 Weak transcription Brain Germinal Matrix brain
13 chr2:32868800-32980800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr2:32869000-32898400 Weak transcription Pancreas Pancrea
15 chr2:32869000-32936200 Weak transcription Brain Hippocampus Middle brain
16 chr2:32869000-32947800 Weak transcription Spleen Spleen
17 chr2:32869200-32913600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr2:32869400-32905400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr2:32869800-32901000 Weak transcription Lung lung
20 chr2:32869800-32964400 Weak transcription Fetal Brain Female brain
21 chr2:32870400-32905600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr2:32871200-32928600 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr2:32874600-32904000 Weak transcription Fetal Thymus thymus
24 chr2:32875000-32904000 Weak transcription Psoas Muscle Psoas
25 chr2:32876200-32904000 Weak transcription GM12878-XiMat blood
26 chr2:32876400-32898600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr2:32876400-32903800 Weak transcription Fetal Kidney kidney
28 chr2:32876400-32904000 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr2:32876400-32980800 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr2:32876600-32900400 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr2:32876800-32898400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:32876800-32900000 Weak transcription Hela-S3 cervix
33 chr2:32878000-32902200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr2:32878200-32905600 Weak transcription NHLF lung
35 chr2:32878400-32900000 Weak transcription K562 blood
36 chr2:32878400-32913400 Weak transcription Muscle Satellite Cultured Cells --
37 chr2:32878400-32936000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr2:32878400-32941000 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr2:32878600-32898200 Weak transcription Fetal Intestine Large intestine
40 chr2:32879400-32931400 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr2:32879600-32905400 Weak transcription A549 lung
42 chr2:32879800-32900200 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr2:32881800-32902800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr2:32881800-32903000 Weak transcription Duodenum Mucosa Duodenum
45 chr2:32881800-32928400 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr2:32881800-32950600 Weak transcription Placenta Placenta
47 chr2:32882000-32903800 Weak transcription Osteobl bone
48 chr2:32882400-32929600 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr2:32884200-32898400 Weak transcription Fetal Muscle Trunk muscle
50 chr2:32884200-32937200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015