Variant report

Variant rs12626191
Chromosome Location chr21:48076363-48076364
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48056200-48081400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr21:48059800-48079200 Strong transcription Osteobl bone
3 chr21:48060200-48085800 Strong transcription Placenta Placenta
4 chr21:48060800-48077200 Strong transcription Fetal Thymus thymus
5 chr21:48060800-48077200 Strong transcription Stomach Smooth Muscle stomach
6 chr21:48061000-48079200 Strong transcription Duodenum Mucosa Duodenum
7 chr21:48061000-48079400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr21:48061000-48079400 Strong transcription Brain Anterior Caudate brain
9 chr21:48061000-48079400 Strong transcription Placenta Amnion Placenta Amnion
10 chr21:48061800-48077600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr21:48062000-48079000 Strong transcription HSMMtube muscle
12 chr21:48062000-48079200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr21:48062200-48079200 Strong transcription Muscle Satellite Cultured Cells --
14 chr21:48063000-48080800 Strong transcription Ovary ovary
15 chr21:48063200-48076600 Strong transcription Rectal Mucosa Donor 29 rectum
16 chr21:48063400-48079400 Strong transcription NH-A brain
17 chr21:48063400-48079600 Strong transcription Skeletal Muscle Female skeletal muscle
18 chr21:48063400-48080800 Strong transcription Rectal Mucosa Donor 31 rectum
19 chr21:48063800-48081400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr21:48066000-48079400 Strong transcription HSMM muscle
21 chr21:48068200-48077400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr21:48069600-48081400 Weak transcription Psoas Muscle Psoas
23 chr21:48070600-48079000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
24 chr21:48070600-48086800 Weak transcription Fetal Heart heart
25 chr21:48071000-48079200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr21:48071000-48080800 Strong transcription Brain Hippocampus Middle brain
27 chr21:48071000-48081600 Weak transcription Right Atrium heart
28 chr21:48071200-48079600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr21:48071800-48079400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr21:48072000-48080400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr21:48072000-48081400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr21:48072000-48081400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr21:48072200-48077400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr21:48072800-48077200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr21:48072800-48077200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr21:48073000-48077000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr21:48073000-48077600 Strong transcription Fetal Brain Male brain
38 chr21:48073200-48077200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr21:48073400-48076600 ZNF genes & repeats Primary B cells from cord blood blood
40 chr21:48073600-48078600 Weak transcription Pancreas Pancrea
41 chr21:48073800-48077400 Weak transcription Lung lung
42 chr21:48073800-48077400 Weak transcription Spleen Spleen
43 chr21:48074000-48078600 Weak transcription Gastric stomach
44 chr21:48074000-48081400 Weak transcription Thymus Thymus
45 chr21:48074000-48084200 Weak transcription H9 Cell Line embryonic stem cell
46 chr21:48074200-48076800 ZNF genes & repeats Primary T cells from cord blood blood
47 chr21:48074200-48077000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
48 chr21:48074200-48085000 Weak transcription Stomach Mucosa stomach
49 chr21:48074400-48076600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
50 chr21:48074400-48076800 ZNF genes & repeats Primary B cells from peripheral blood blood

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