Variant report

Variant	rs12627155
Chromosome Location	chr21:16623362-16623363
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:16452819..16455240-chr21:16621879..16624162,2	K562	blood:
2	chr21:16609680..16611486-chr21:16620400..16623388,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs2244105	1.00[JPT][hapmap]
rs8133575	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1063385	chr21:16521617-16926212	Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16613200-16624000	Weak transcription	Rectal Smooth Muscle	rectum
2	chr21:16616200-16626200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr21:16617200-16624000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr21:16618800-16623400	Weak transcription	Primary hematopoietic stem cells	blood
5	chr21:16620000-16623800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr21:16620000-16624000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr21:16620000-16624200	Weak transcription	Colon Smooth Muscle	Colon
8	chr21:16620600-16623800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr21:16620800-16623800	Enhancers	NHEK	skin
10	chr21:16620800-16624200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr21:16620800-16624200	Enhancers	HMEC	breast
12	chr21:16621000-16623800	Enhancers	K562	blood
13	chr21:16621000-16628200	Weak transcription	HepG2	liver
14	chr21:16621400-16623400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr21:16621800-16624400	Enhancers	NH-A	brain
16	chr21:16622000-16623400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr21:16622200-16623400	Enhancers	Osteobl	bone
18	chr21:16622400-16623800	Enhancers	HSMMtube	muscle
19	chr21:16622800-16623800	Enhancers	Muscle Satellite Cultured Cells	--
20	chr21:16622800-16625200	Enhancers	HSMM	muscle
21	chr21:16623000-16623400	Enhancers	A549	lung
22	chr21:16623000-16623400	Enhancers	NHLF	lung

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