Variant report

Variant rs12627400
Chromosome Location chr21:47715106-47715107
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47707000-47715200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr21:47707000-47717400 Weak transcription Small Intestine intestine
3 chr21:47707200-47715800 Weak transcription Right Atrium heart
4 chr21:47707200-47717400 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr21:47707400-47715800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr21:47707400-47717200 Weak transcription Psoas Muscle Psoas
7 chr21:47707600-47715200 Weak transcription Fetal Heart heart
8 chr21:47708200-47715800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr21:47710000-47717400 Weak transcription Placenta Amnion Placenta Amnion
10 chr21:47710000-47727600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr21:47710200-47716000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr21:47710200-47720400 Weak transcription Hela-S3 cervix
13 chr21:47711600-47717400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr21:47711600-47717400 Weak transcription NHEK skin
15 chr21:47711800-47717400 Weak transcription HUVEC blood vessel
16 chr21:47712000-47717200 Weak transcription Rectal Smooth Muscle rectum
17 chr21:47712000-47719200 Weak transcription A549 lung
18 chr21:47712200-47717200 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr21:47712200-47717200 Weak transcription Primary T cells from cord blood blood
20 chr21:47712200-47717400 Weak transcription Brain Cingulate Gyrus brain
21 chr21:47712200-47717400 Weak transcription Brain Hippocampus Middle brain
22 chr21:47712200-47717400 Weak transcription HMEC breast
23 chr21:47712200-47717600 Weak transcription Aorta Aorta
24 chr21:47712200-47717600 Weak transcription Fetal Kidney kidney
25 chr21:47712400-47715200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr21:47712400-47715200 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr21:47712400-47715200 Weak transcription Lung lung
28 chr21:47712400-47715400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr21:47712400-47715800 Weak transcription Primary B cells from cord blood blood
30 chr21:47712400-47715800 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr21:47712400-47716200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr21:47712400-47717200 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr21:47712400-47717200 Weak transcription Brain Anterior Caudate brain
34 chr21:47712400-47717200 Weak transcription Esophagus oesophagus
35 chr21:47712400-47717400 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr21:47712400-47717400 Weak transcription Liver Liver
37 chr21:47712400-47717400 Weak transcription Brain Angular Gyrus brain
38 chr21:47712400-47717400 Weak transcription Brain Inferior Temporal Lobe brain
39 chr21:47712400-47717400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr21:47712400-47717400 Weak transcription Brain Substantia Nigra brain
41 chr21:47712400-47717400 Weak transcription Gastric stomach
42 chr21:47712400-47717400 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr21:47712400-47717600 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr21:47712400-47719000 Weak transcription Dnd41 blood
45 chr21:47713800-47715400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr21:47714600-47715200 Enhancers HUES6 Cell Line embryonic stem cell
47 chr21:47714600-47715200 Flanking Active TSS K562 blood
48 chr21:47714600-47715400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr21:47714600-47715400 Enhancers Pancreas Pancrea
50 chr21:47714600-47715400 Enhancers GM12878-XiMat blood

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