Variant report
| Variant | rs12627772 |
|---|---|
| Chromosome Location | chr22:30956994-30956995 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:30939000-30962000 | Weak transcription | Liver | Liver |
| 2 | chr22:30944800-30968000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 3 | chr22:30945800-30957400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 4 | chr22:30946200-30957600 | Weak transcription | Spleen | Spleen |
| 5 | chr22:30947800-30957600 | Weak transcription | Fetal Muscle Leg | muscle |
| 6 | chr22:30948400-30961800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 7 | chr22:30950000-30957400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 8 | chr22:30950200-30957200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 9 | chr22:30950600-30969000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 10 | chr22:30951600-30960200 | Weak transcription | Brain Germinal Matrix | brain |
| 11 | chr22:30951800-30960200 | Weak transcription | Brain Angular Gyrus | brain |
| 12 | chr22:30952200-30960400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 13 | chr22:30952400-30960200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 14 | chr22:30952600-30961600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 15 | chr22:30953200-30957400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 16 | chr22:30953200-30957400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 17 | chr22:30953200-30958600 | Weak transcription | Pancreas | Pancrea |
| 18 | chr22:30953200-30960000 | Weak transcription | Brain Anterior Caudate | brain |
| 19 | chr22:30953400-30960200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 20 | chr22:30953400-30960200 | Weak transcription | Brain Substantia Nigra | brain |
| 21 | chr22:30953800-30965200 | Weak transcription | Gastric | stomach |
| 22 | chr22:30954600-30957600 | Weak transcription | Brain Hippocampus Middle | brain |
| 23 | chr22:30955600-30958600 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 24 | chr22:30955600-30958800 | Enhancers | H1 Cell Line | embryonic stem cell |
| 25 | chr22:30955600-30958800 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 26 | chr22:30955800-30958000 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 27 | chr22:30956200-30958800 | Enhancers | A549 | lung |
| 28 | chr22:30956400-30957400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 29 | chr22:30956400-30957600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 30 | chr22:30956400-30957600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 31 | chr22:30956600-30957000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 32 | chr22:30956600-30957000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 33 | chr22:30956600-30957000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 34 | chr22:30956600-30957000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 35 | chr22:30956600-30957000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 36 | chr22:30956600-30957000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 37 | chr22:30956600-30958000 | Enhancers | HepG2 | liver |
| 38 | chr22:30956600-30958200 | Genic enhancers | Fetal Intestine Small | intestine |
| 39 | chr22:30956600-30958400 | Enhancers | Fetal Intestine Large | intestine |
| 40 | chr22:30956800-30957200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
