Variant report

Variant rs12629949
Chromosome Location chr3:196006074-196006075
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195965800-196012400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr3:195969600-196012400 Weak transcription Fetal Brain Male brain
3 chr3:195990400-196006400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:195991800-196012400 Weak transcription Rectal Smooth Muscle rectum
5 chr3:195996600-196006200 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr3:195996600-196012600 Weak transcription Fetal Kidney kidney
7 chr3:195997400-196006200 Weak transcription HSMM muscle
8 chr3:195997400-196006400 Weak transcription Brain Angular Gyrus brain
9 chr3:195997600-196007800 Weak transcription Small Intestine intestine
10 chr3:195997600-196010600 Weak transcription Colon Smooth Muscle Colon
11 chr3:195997800-196006200 Weak transcription Brain Hippocampus Middle brain
12 chr3:196000200-196006200 Weak transcription Brain Cingulate Gyrus brain
13 chr3:196000400-196006400 Weak transcription HSMMtube muscle
14 chr3:196000600-196006200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr3:196000600-196006200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr3:196000600-196006200 Weak transcription Colonic Mucosa Colon
17 chr3:196000600-196011200 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr3:196000600-196012400 Weak transcription Fetal Brain Female brain
19 chr3:196000600-196012600 Weak transcription Fetal Lung lung
20 chr3:196000600-196012800 Weak transcription Ovary ovary
21 chr3:196000600-196013800 Weak transcription Aorta Aorta
22 chr3:196000800-196006200 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr3:196001000-196006200 Weak transcription Brain Substantia Nigra brain
24 chr3:196001000-196011600 Weak transcription Thymus Thymus
25 chr3:196001000-196013800 Weak transcription H9 Cell Line embryonic stem cell
26 chr3:196001200-196006200 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr3:196001200-196006200 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr3:196001200-196011400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr3:196001200-196013600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr3:196001400-196006200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr3:196001400-196006400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr3:196001400-196013000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr3:196001400-196013200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr3:196001600-196013000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr3:196001800-196006200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr3:196001800-196006200 Weak transcription Brain Anterior Caudate brain
37 chr3:196001800-196006200 Weak transcription NHLF lung
38 chr3:196001800-196008000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr3:196001800-196010600 Weak transcription H1 Cell Line embryonic stem cell
40 chr3:196001800-196011600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr3:196001800-196012600 Weak transcription Primary T cells from cord blood blood
42 chr3:196001800-196012600 Weak transcription Fetal Stomach stomach
43 chr3:196002000-196011600 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr3:196002200-196006200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr3:196002200-196006400 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr3:196002200-196011800 Weak transcription Dnd41 blood
47 chr3:196002200-196012600 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr3:196002400-196011600 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr3:196002400-196012600 Weak transcription Primary B cells from peripheral blood blood
50 chr3:196004800-196007200 Enhancers Primary monocytes fromperipheralblood blood

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